RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 EXOC2Q96KP1 924 aa25.77■■□□□ 1.72
U2AF1-203ENST00000398137 CCDC114Q96M63 670 aa25.77■■□□□ 1.72
U2AF1-203ENST00000398137 FAM129BQ96TA1 746 aa25.77■■□□□ 1.72
U2AF1-203ENST00000398137 MIR1-1HGQ9H1L0 117 aa25.77■■□□□ 1.72
U2AF1-203ENST00000398137 PCED1AQ9H1Q7 454 aa25.77■■□□□ 1.72
U2AF1-203ENST00000398137 FRYQ5TBA9 3013 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 C10orf142B7Z368 130 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 BCAT2O15382 392 aaPredicted RBP25.76■■□□□ 1.71
U2AF1-203ENST00000398137 CEP104O60308 925 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 OPHN1O60890 802 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 CCNCP24863 283 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 AP1B1Q10567 949 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 KLF1Q13351 362 aaPredicted RBP25.76■■□□□ 1.71
U2AF1-203ENST00000398137 ZNF235Q14590 738 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 CARD16Q5EG05 197 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 DPY19L3Q6ZPD9 716 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 ADAT2Q7Z6V5 191 aaKnown RBP25.76■■□□□ 1.71
U2AF1-203ENST00000398137 ZC3H18Q86VM9 953 aaKnown RBP25.76■■□□□ 1.71
U2AF1-203ENST00000398137 SLC13A5Q86YT5 568 aaPredicted RBP25.76■■□□□ 1.71
U2AF1-203ENST00000398137 RYBPQ8N488 228 aaPredicted RBP25.76■■□□□ 1.71
U2AF1-203ENST00000398137 CHST14Q8NCH0 376 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 OR6K2Q8NGY2 324 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 OR8D1Q8WZ84 308 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 GDAP1L1Q96MZ0 367 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 PABPC3Q9H361 631 aaKnown RBP25.76■■□□□ 1.71
U2AF1-203ENST00000398137 SEPT3Q9UH03 358 aa25.76■■□□□ 1.71
U2AF1-203ENST00000398137 KMT2BQ9UMN6 2715 aaPredicted RBP25.75■■□□□ 1.71
U2AF1-203ENST00000398137 EPG5Q9HCE0 2579 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 PLXNA2O75051 1894 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 TMEM131Q92545 1883 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 MATN3O15232 486 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 SEMA4FO95754 770 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 GSRP00390 522 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 DNTTP04053 509 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 CCNHP51946 323 aaPredicted RBP25.75■■□□□ 1.71
U2AF1-203ENST00000398137 PRKD1Q15139 912 aaPredicted RBP25.75■■□□□ 1.71
U2AF1-203ENST00000398137 MMAAQ8IVH4 418 aaKnown RBP25.75■■□□□ 1.71
U2AF1-203ENST00000398137 HDDC3Q8N4P3 179 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 TSEN2Q8NCE0 465 aaKnown RBP25.75■■□□□ 1.71
U2AF1-203ENST00000398137 OR2AP1Q8NGE2 309 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 GRIN3AQ8TCU5 1115 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 MAML1Q92585 1016 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 BIRC7Q96CA5 298 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 QKIQ96PU8 341 aaKnown RBP eCLIP25.75■■□□□ 1.71
U2AF1-203ENST00000398137 BTBD1Q9H0C5 482 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 IL21RQ9HBE5 538 aa25.75■■□□□ 1.71
U2AF1-203ENST00000398137 R3HDM2Q9Y2K5 976 aaKnown RBP25.75■■□□□ 1.71
U2AF1-203ENST00000398137 FARP1Q9Y4F1 1045 aaPredicted RBP25.75■■□□□ 1.71
U2AF1-203ENST00000398137 SPAARA0A1B0GVQ0 90 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 H7C0C1 242 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 KCNK1O00180 336 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 MUSKO15146 869 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 IGSF6O95976 241 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 MMP13P45452 471 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 RGRP47804 291 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 ATP5OP48047 213 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 PSMD8P48556 350 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 SNRPD1P62314 119 aaKnown RBP25.74■■□□□ 1.71
U2AF1-203ENST00000398137 CST6Q15828 149 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 MARC1Q5VT66 337 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 DSG4Q86SJ6 1040 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 TFB1MQ8WVM0 346 aaKnown RBP25.74■■□□□ 1.71
U2AF1-203ENST00000398137 FATE1Q969F0 183 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 CAMK1GQ96NX5 476 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 NAPGQ99747 312 aaPredicted RBP25.74■■□□□ 1.71
U2AF1-203ENST00000398137 BRD8Q9H0E9 1235 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 ZDHHC6Q9H6R6 413 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 SEPT10Q9P0V9 454 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 SNX12Q9UMY4 172 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 ASPMQ8IZT6 3477 aa25.74■■□□□ 1.71
U2AF1-203ENST00000398137 MCF2LO15068 1137 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 ALOX15BO15296 676 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 MID1O15344 667 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 RNASEH1O60930 286 aaKnown RBP25.73■■□□□ 1.71
U2AF1-203ENST00000398137 FGGP02679 453 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 IGHV4-34P06331 123 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 CTSLP07711 333 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 CCNB1P14635 433 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 SPINK2P20155 84 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 CHRNA3P32297 505 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 EIF3EP60228 445 aaKnown RBP25.73■■□□□ 1.71
U2AF1-203ENST00000398137 FOXC1Q12948 553 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 USP30Q70CQ3 517 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 BBS5Q8N3I7 341 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 PGBD5Q8N414 524 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 PSKH2Q96QS6 385 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 OSBPL9Q96SU4 736 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 SGK2Q9HBY8 427 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 NT5MQ9NPB1 228 aa25.73■■□□□ 1.71
U2AF1-203ENST00000398137 KRIT1O00522 736 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 FANCGO15287 622 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 NEBLO76041 1014 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 IL1BP01584 269 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 GKP32189 559 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 RENBPP51606 427 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 IFI35P80217 286 aaPredicted RBP25.72■■□□□ 1.71
U2AF1-203ENST00000398137 ZBTB17Q13105 803 aa25.72■■□□□ 1.71
U2AF1-203ENST00000398137 HNRNPDQ14103 355 aaKnown RBP25.72■■□□□ 1.71
U2AF1-203ENST00000398137 TTC31Q49AM3 519 aaPredicted RBP25.72■■□□□ 1.71
U2AF1-203ENST00000398137 SLC45A4Q5BKX6 768 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms