RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 FNDC8Q8TC99 324 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 SHDQ96IW2 340 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 GBP5Q96PP8 586 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 ZIC5Q96T25 663 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 CENPKQ9BS16 269 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 TMEM109Q9BVC6 243 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 RUSC1Q9BVN2 902 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 ZC3H12CQ9C0D7 883 aaKnown RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 COA1Q9GZY4 146 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 OR10A4Q9H209 315 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 KCND2Q9NZV8 630 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 NYAP2Q9P242 653 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 PCYOX1Q9UHG3 505 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 TINAGQ9UJW2 476 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 APOBEC2Q9Y235 224 aaKnown RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 DDX60LQ5H9U9 1706 aaKnown RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 KIAA0391O15091 583 aaKnown RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 LGR5O75473 907 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 PABPC1P11940 636 aaKnown RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 ICAM2P13598 275 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 PCGF2P35227 344 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 GPR3P46089 330 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 ATP11AP98196 1134 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 RCN2Q14257 317 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 SMU1Q2TAY7 513 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 CERKLQ49MI3 558 aaPredicted RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 PIK3R6Q5UE93 754 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 RINT1Q6NUQ1 792 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 MMAAQ8IVH4 418 aaKnown RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 CCDC28AQ8IWP9 274 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 LIX1Q8N485 282 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 MCPH1Q8NEM0 835 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 FAM111AQ96PZ2 611 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 NACC1Q96RE7 527 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 THAP2Q9H0W7 228 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 CPA4Q9UI42 421 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 PLXNB2O15031 1838 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 PGPEP1LA6NFU8 196 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 PITPNM1O00562 1244 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 POLR1CO15160 346 aaPredicted RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 FTLP02792 175 aaPredicted RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 GBX2P52951 348 aaPredicted RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 PHC1P78364 1004 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 KLRC3Q07444 240 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 ALCAMQ13740 583 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 MESDQ14696 234 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 GRIK4Q16099 956 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 LIN9Q5TKA1 542 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC25A24Q6NUK1 477 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 BRICD5Q6PL45 260 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 PIWIL3Q7Z3Z3 882 aaKnown RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 GALNT12Q8IXK2 581 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 CRYBG2Q8N1P7 616 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 GPR156Q8NFN8 814 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 TBC1D16Q8TBP0 767 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 PDCD6IPQ8WUM4 868 aaKnown RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 ASB12Q8WXK4 309 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 ZDHHC12Q96GR4 267 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 TREX2Q9BQ50 279 aaPredicted RBP6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 FAM83CQ9BQN1 747 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 ZSWIM1Q9BR11 485 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 STRA6Q9BX79 667 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 RBCK1Q9BYM8 510 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 ZDHHC18Q9NUE0 388 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 ERVK-11Q9UQG0 969 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC22A14Q9Y267 594 aa6.66□□□□□ -1.34
TM9SF4-202ENST00000398022 ARHGEF35A5YM69 484 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 TRPC5OSA6NMA1 111 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 MSH4O15457 936 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 GAS7O60861 476 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 IFI35P80217 286 aaPredicted RBP6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 SPIRE1Q08AE8 756 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 C1orf146Q5VVC0 180 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 PLEKHA7Q6IQ23 1121 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 DPY19L2P1Q6NXN4 242 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 PLEKHH3Q7Z736 793 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 ADAMTSL2Q86TH1 951 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 CROCCP3Q8IVE0 287 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 TMIEQ8NEW7 156 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 Q8NFD4 153 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 KCTD4Q8WVF5 259 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 ANAPC16Q96DE5 110 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 DNAJC1Q96KC8 554 aaKnown RBP6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 PRMT1Q99873 361 aaKnown RBP6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 RBM4BQ9BQ04 359 aaKnown RBP6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 RBM4Q9BWF3 364 aaKnown RBP6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 WDR11Q9BZH6 1224 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 TRIT1Q9H3H1 467 aaKnown RBP6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 HIPK3Q9H422 1215 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 CCDC134Q9H6E4 229 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 MARCH7Q9H992 704 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 UBE2TQ9NPD8 197 aaPredicted RBP6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 SERINC1Q9NRX5 453 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 NKIRAS1Q9NYS0 192 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 SCOCQ9UIL1 159 aa6.65□□□□□ -1.34
TM9SF4-202ENST00000398022 E9PBE3 544 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 MEIS2O14770 477 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 PPEF2O14830 753 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 TGFB1I1O43294 461 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 CHMP2AO43633 222 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms