RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 PDZD4Q76G19 769 aaPredicted RBP17.5■□□□□ 0.39
EWSR1-206ENST00000397938 FASTKD5Q7L8L6 764 aaKnown RBP17.5■□□□□ 0.39
EWSR1-206ENST00000397938 CAMK1DQ8IU85 385 aa17.5■□□□□ 0.39
EWSR1-206ENST00000397938 MFSD6LQ8IWD5 586 aa17.5■□□□□ 0.39
EWSR1-206ENST00000397938 SPATA33Q96N06 139 aa17.5■□□□□ 0.39
EWSR1-206ENST00000397938 MRPL57Q9BQC6 102 aaKnown RBP17.5■□□□□ 0.39
EWSR1-206ENST00000397938 CXCL16Q9H2A7 254 aa17.5■□□□□ 0.39
EWSR1-206ENST00000397938 SNX25Q9H3E2 840 aa17.5■□□□□ 0.39
EWSR1-206ENST00000397938 RAD54BQ9Y620 910 aa17.5■□□□□ 0.39
EWSR1-206ENST00000397938 FAM95CA0A1B0GW59 222 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 GIPC1O14908 333 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 STMN1P16949 149 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 ATP5F1P24539 256 aaPredicted RBP17.49■□□□□ 0.39
EWSR1-206ENST00000397938 TTKP33981 857 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 IGBP1P78318 339 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 CDH17Q12864 832 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 TGFBIQ15582 683 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 NT5C3BQ969T7 300 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 SGF29Q96ES7 293 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 NPY6RQ99463 290 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 SMARCAD1Q9H4L7 1026 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 CCM2LQ9NUG4 571 aaPredicted RBP17.49■□□□□ 0.39
EWSR1-206ENST00000397938 GMPR2Q9P2T1 348 aaKnown RBP17.49■□□□□ 0.39
EWSR1-206ENST00000397938 CLASP2O75122 1294 aaKnown RBP17.49■□□□□ 0.39
EWSR1-206ENST00000397938 INHBBP09529 407 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 IDO1P14902 403 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 ZNF12P17014 697 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 NOS2P35228 1153 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 POLD2P49005 469 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 ZNF280AP59817 542 aaPredicted RBP17.49■□□□□ 0.39
EWSR1-206ENST00000397938 MPP1Q00013 466 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 RELAQ04206 551 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 MERTKQ12866 999 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 PDCD4Q53EL6 469 aaKnown RBP17.49■□□□□ 0.39
EWSR1-206ENST00000397938 CNTN4Q8IWV2 1026 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 AFAP1L2Q8N4X5 818 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 SNX31Q8N9S9 440 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 TNFRSF12AQ9NP84 129 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 INIPQ9NRY2 104 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 TRHDEQ9UKU6 1024 aa17.49■□□□□ 0.39
EWSR1-206ENST00000397938 NEMP2A6NFY4 417 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 FAM72CH0Y354 149 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 M0QYT0 321 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 CCR3P51677 355 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 PMS2P3Q13401 168 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 SLC36A3Q495N2 470 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 FAM72AQ5TYM5 149 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 FAM72DQ6L9T8 149 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 FAM72BQ86X60 149 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 ERO1BQ86YB8 467 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 DENND6AQ8IWF6 608 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 TERB1Q8NA31 727 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 ZUFSPQ96AP4 578 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 SLC39A3Q9BRY0 314 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 PFDN4Q9NQP4 134 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 SFMBT1Q9UHJ3 866 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 HACL1Q9UJ83 578 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 A0A1W2PPW3 197 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 NCAM2O15394 837 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 MTSS1O43312 755 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 PSMD7P51665 324 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 ADIGQ0VDE8 80 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 NME3Q13232 169 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 RAB39AQ14964 217 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 MAP7D1Q3KQU3 841 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 PITRM1Q5JRX3 1037 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 TBCELQ5QJ74 424 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 DCDC5Q6ZRR9 648 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 NPWQ8N729 165 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 OR9I1Q8NGQ6 314 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 PLEKHA8Q96JA3 519 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 UBP1Q9NZI7 540 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 TUBGCP4Q9UGJ1 667 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 WDR37Q9Y2I8 494 aa17.48■□□□□ 0.39
EWSR1-206ENST00000397938 TRIM64BA6NI03 449 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 TSPAN1O60635 241 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 GPC4O75487 556 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 GRM5P41594 1212 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 C21orf59P57076 290 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 AARS2Q5JTZ9 985 aaKnown RBP17.47■□□□□ 0.39
EWSR1-206ENST00000397938 GPR107Q5VW38 600 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 NAPEPLDQ6IQ20 393 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 LBX2Q6XYB7 198 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 ZNF354CQ86Y25 554 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 RIOX2Q8IUF8 465 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 CRYBG2Q8N1P7 616 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 LRRC52Q8N7C0 313 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 SHCBP1Q8NEM2 672 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 SLC2A14Q8TDB8 520 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 HEXDCQ8WVB3 486 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 HDAC11Q96DB2 347 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 ZMAT2Q96NC0 199 aaKnown RBP17.47■□□□□ 0.39
EWSR1-206ENST00000397938 MRM3Q9HC36 420 aaKnown RBP17.47■□□□□ 0.39
EWSR1-206ENST00000397938 AGPAT4Q9NRZ5 378 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 PIGVQ9NUD9 493 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 COQ6Q9Y2Z9 468 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 FNDC1Q4ZHG4 1894 aaPredicted RBP17.47■□□□□ 0.39
EWSR1-206ENST00000397938 SHROOM3Q8TF72 1996 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 RALGAPA2Q2PPJ7 1873 aa17.47■□□□□ 0.39
EWSR1-206ENST00000397938 TSC2P49815 1807 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms