RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ATP5BP06576 529 aaKnown RBP27.78■■■□□ 2.04
CPNE1-203ENST00000397442 TSHRP16473 764 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 LEXMQ3ZCV2 418 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 SIRPB2Q5JXA9 342 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 LRIG3Q6UXM1 1119 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 SLC25A41Q8N5S1 370 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 PCDH20Q8N6Y1 951 aaKnown RBP27.78■■■□□ 2.04
CPNE1-203ENST00000397442 OR6K2Q8NGY2 324 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 FRS2Q8WU20 508 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 IL22Q9GZX6 179 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 VPS37BQ9H9H4 285 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 KCNK12Q9HB15 430 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 LIMD1Q9UGP4 676 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 EVLQ9UI08 416 aaPredicted RBP27.78■■■□□ 2.04
CPNE1-203ENST00000397442 SRPRAP08240 638 aaKnown RBP27.77■■■□□ 2.04
CPNE1-203ENST00000397442 TRAF2Q12933 501 aa27.77■■■□□ 2.04
CPNE1-203ENST00000397442 UNC5AQ6ZN44 842 aa27.77■■■□□ 2.04
CPNE1-203ENST00000397442 C3orf62Q6ZUJ4 267 aa27.77■■■□□ 2.04
CPNE1-203ENST00000397442 CFAP36Q96G28 342 aa27.77■■■□□ 2.04
CPNE1-203ENST00000397442 RAI2Q9Y5P3 530 aa27.77■■■□□ 2.04
CPNE1-203ENST00000397442 IGSF6O95976 241 aa27.76■■■□□ 2.03
CPNE1-203ENST00000397442 GSRP00390 522 aa27.76■■■□□ 2.03
CPNE1-203ENST00000397442 SOX9P48436 509 aa27.76■■■□□ 2.03
CPNE1-203ENST00000397442 FAM193AP78312 1265 aa27.76■■■□□ 2.03
CPNE1-203ENST00000397442 ZNF844Q08AG5 666 aa27.76■■■□□ 2.03
CPNE1-203ENST00000397442 EIF4HQ15056 248 aaKnown RBP27.76■■■□□ 2.03
CPNE1-203ENST00000397442 ACCSLQ4AC99 568 aa27.76■■■□□ 2.03
CPNE1-203ENST00000397442 CASC4Q6P4E1 433 aa27.76■■■□□ 2.03
CPNE1-203ENST00000397442 PLCD3Q8N3E9 789 aa27.76■■■□□ 2.03
CPNE1-203ENST00000397442 IFT43Q96FT9 208 aa27.76■■■□□ 2.03
CPNE1-203ENST00000397442 CHKBQ9Y259 395 aa27.76■■■□□ 2.03
CPNE1-203ENST00000397442 SNRPD1P62314 119 aaKnown RBP27.75■■■□□ 2.03
CPNE1-203ENST00000397442 STEAP4Q687X5 459 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 SLC44A3Q8N4M1 653 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 ARIH1Q9Y4X5 557 aaPredicted RBP27.75■■■□□ 2.03
CPNE1-203ENST00000397442 TTC34A8MYJ7 566 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.75■■■□□ 2.03
CPNE1-203ENST00000397442 TIMM44O43615 452 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 NDST3O95803 873 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 PDHA1P08559 390 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 PGAM1P18669 254 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 HLA-DPA1P20036 260 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 GKP32189 559 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 GALNT3Q14435 633 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 CARD16Q5EG05 197 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 Q6ZVU0 165 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 NAT9Q9BTE0 207 aa27.75■■■□□ 2.03
CPNE1-203ENST00000397442 A0A087WUV0 522 aaPredicted RBP27.74■■■□□ 2.03
CPNE1-203ENST00000397442 FZD6O60353 706 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 KAT7O95251 611 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 FGF1P05230 155 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 MAPK8P45983 427 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 MYLK3Q32MK0 819 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 DPY19L3Q6ZPD9 716 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 TMEM135Q86UB9 458 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 CCNJLQ8IV13 435 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 PLPP6Q8IY26 295 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 OR2A12Q8NGT7 310 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 FBRSL1Q9HCM7 1045 aaKnown RBP27.74■■■□□ 2.03
CPNE1-203ENST00000397442 TRPV5Q9NQA5 729 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 RABGEF1Q9UJ41 708 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 SOX13Q9UN79 622 aa27.74■■■□□ 2.03
CPNE1-203ENST00000397442 TCRBV9S1A1TA0A576 114 aa27.73■■■□□ 2.03
CPNE1-203ENST00000397442 TRAFD1O14545 582 aaPredicted RBP27.73■■■□□ 2.03
CPNE1-203ENST00000397442 SPAG6O75602 509 aa27.73■■■□□ 2.03
CPNE1-203ENST00000397442 EIF3BP55884 814 aaKnown RBP27.73■■■□□ 2.03
CPNE1-203ENST00000397442 POU6F1Q14863 301 aa27.73■■■□□ 2.03
CPNE1-203ENST00000397442 CAMK1DQ8IU85 385 aa27.73■■■□□ 2.03
CPNE1-203ENST00000397442 CSGALNACT1Q8TDX6 532 aa27.73■■■□□ 2.03
CPNE1-203ENST00000397442 KIFC1Q9BW19 673 aa27.73■■■□□ 2.03
CPNE1-203ENST00000397442 CHRAC1Q9NRG0 131 aa27.73■■■□□ 2.03
CPNE1-203ENST00000397442 SAMD15Q9P1V8 674 aa27.73■■■□□ 2.03
CPNE1-203ENST00000397442 HCN2Q9UL51 889 aa27.73■■■□□ 2.03
CPNE1-203ENST00000397442 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP27.72■■■□□ 2.03
CPNE1-203ENST00000397442 TBC1D3BA6NDS4 549 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 C1QAP02745 245 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 GSTA2P09210 222 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 BMP1P13497 986 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 PHBP35232 272 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 NNMTP40261 264 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 CCNHP51946 323 aaPredicted RBP27.72■■■□□ 2.03
CPNE1-203ENST00000397442 PCID2Q5JVF3 399 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 PTCRAQ6ISU1 281 aaPredicted RBP27.72■■■□□ 2.03
CPNE1-203ENST00000397442 FBF1Q8TES7 1133 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 ACBD3Q9H3P7 528 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 FAM237BA0A1B0GVD1 139 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 MAGEB16A2A368 324 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 ANTXRLA6NF34 631 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 HTRA2O43464 458 aaPredicted RBP27.72■■■□□ 2.03
CPNE1-203ENST00000397442 PIGNO95427 931 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 GRIA2P42262 883 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 CRYMQ14894 314 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 CEP85LQ5SZL2 805 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 CES3Q6UWW8 571 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 RYBPQ8N488 228 aaPredicted RBP27.72■■■□□ 2.03
CPNE1-203ENST00000397442 KDM1BQ8NB78 822 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 GSDMBQ8TAX9 411 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 ZNF778Q96MU6 729 aa27.72■■■□□ 2.03
CPNE1-203ENST00000397442 FCRL3Q96P31 734 aaPredicted RBP27.72■■■□□ 2.03
CPNE1-203ENST00000397442 SH3GL2Q99962 352 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms