RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 C5orf51A6NDU8 294 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 LHCGRP22888 699 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 PSEN2P49810 448 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 PSME3P61289 254 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 POLR2LP62875 67 aaKnown RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 ZNF234Q14588 700 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 SERPINA13PQ6UXR4 307 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 STOX1Q6ZVD7 989 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 TTC7BQ86TV6 843 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 PPP1R16AQ96I34 528 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 CDC42EP4Q9H3Q1 356 aaKnown RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 ABL2P42684 1182 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 SLC39A12Q504Y0 691 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 WDR59Q6PJI9 974 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 ZNF677Q86XU0 584 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 PNPT1Q8TCS8 783 aaKnown RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 PLEKHF1Q96S99 279 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 SPATA5L1Q9BVQ7 753 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 ASB8Q9H765 288 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 ATPIF1Q9UII2 106 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 A0A087WXM4 84 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 M0R036 132 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 ATP6V1G2O95670 118 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 PTGES3Q15185 160 aaKnown RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 GRTP1Q5TC63 336 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 CCNJLQ8IV13 435 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 NOA1Q8NC60 698 aaKnown RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 AP3S1Q92572 193 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 ZKSCAN4Q969J2 545 aaPredicted RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 ATG4CQ96DT6 458 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 SPON1Q9HCB6 807 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 GPR89AB7ZAQ6 455 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 C19orf81C9J6K1 198 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 CST1P01037 141 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 GPR89BP0CG08 455 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 AQP1P29972 269 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 CD86P42081 329 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 LHX1P48742 406 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 ZFRQ96KR1 1074 aaKnown RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 RIOK2Q9BVS4 552 aaKnown RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 OSBPL5Q9H0X9 879 aaPredicted RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 KCNH7Q9NS40 1196 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 CIDEBQ9UHD4 219 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 VPS4AQ9UN37 437 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 ARL5AQ9Y689 179 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 CPDO75976 1380 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 RPRD2Q5VT52 1461 aaKnown RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 URADA6NGE7 173 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 H3BM21 787 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 L7N2F9 121 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 IFNGP01579 166 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 SLC12A3P55017 1021 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 VAMP2P63027 116 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 ITIH4Q14624 930 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 ATP13A5Q4VNC0 1218 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 PLCZ1Q86YW0 608 aa12.42□□□□□ -0.42
SMU1-201ENST00000397149 SAMHD1Q9Y3Z3 626 aaKnown RBP12.42□□□□□ -0.42
SMU1-201ENST00000397149 RGSL1A5PLK6 1076 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 DRG2P55039 364 aaKnown RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 MINDY4Q4G0A6 757 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 NAT16Q8N8M0 369 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 CDYL2Q8N8U2 506 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 TRPV1Q8NER1 839 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 SLC28A1O00337 649 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 PLGP00747 810 aaPredicted RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 GHRP10912 638 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 AXLP30530 894 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 RPL38P63173 70 aaKnown RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 ABCA11PQ4W5N1 156 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 KLHDC7AQ5VTJ3 777 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 SRFBP1Q8NEF9 429 aaKnown RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 PCDH19Q8TAB3 1148 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 DNAJA4Q8WW22 397 aaPredicted RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 CORO1BQ9BR76 489 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 OAZ2O95190 189 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 CATP04040 527 aaKnown RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 FDPSP14324 419 aaKnown RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 PAX7P23759 505 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 PTX3P26022 381 aaPredicted RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 TRMT5Q32P41 509 aaKnown RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 GPR135Q8IZ08 494 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 STARD8Q92502 1023 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 DNASE1L2Q92874 299 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 IMP3Q9NV31 184 aaKnown RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 MYOM2P54296 1465 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 SLC25A27O95847 323 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 FADS2O95864 444 aaKnown RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 SEPHS1P49903 392 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 MAPK7Q13164 816 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 SPIN3Q5JUX0 258 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 ZBTB8BQ8NAP8 495 aaPredicted RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 DNAJB3Q8WWF6 145 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 CLIC5Q9NZA1 410 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 CARD8Q9Y2G2 431 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 YARS2Q9Y2Z4 477 aaKnown RBP12.41□□□□□ -0.42
SMU1-201ENST00000397149 FAM240BA0A1B0GVZ2 78 aa12.41□□□□□ -0.42
SMU1-201ENST00000397149 NRP2O60462 931 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms