RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 BRMS1LQ5PSV4 323 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 OTUD1Q5VV17 481 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-202ENST00000396629 TMPRSS9Q7Z410 1059 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 HID1Q8IV36 788 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 WDTC1Q8N5D0 677 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 EHBP1Q8NDI1 1231 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 NKD1Q969G9 470 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 TSACCQ96A04 125 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-202ENST00000396629 ARHGEF26Q96DR7 871 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 C1orf74Q96LT6 269 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 C1QTNF7Q9BXJ2 289 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 CDH19Q9H159 772 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 ZDHHC6Q9H6R6 413 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 MPP6Q9NZW5 540 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 SNX10Q9Y5X0 201 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 RNF215Q9Y6U7 377 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 RELNP78509 3460 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 STMND1H3BQB6 276 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 DAB1O75553 588 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 GRAP2O75791 330 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 TM7SF2O76062 418 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 LETM1O95202 739 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-202ENST00000396629 GLB1P16278 677 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 OR1E1P30953 314 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 GKP32189 559 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 CCR10P46092 362 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 CD97P48960 835 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 ATP1A2P50993 1020 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 C16orf72Q14CZ0 275 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 CERCAMQ5T4B2 595 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 ACBD5Q5T8D3 534 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-202ENST00000396629 TMEM164Q5U3C3 297 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 LRRC31Q6UY01 552 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 SPRED1Q7Z699 444 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 TFAP2DQ7Z6R9 452 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 Q8N9G6 341 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-202ENST00000396629 GPBAR1Q8TDU6 330 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 CATSPER2Q96P56 530 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 CPXM1Q96SM3 734 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 NPY6RQ99463 290 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 SPON2Q9BUD6 331 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 TKTL2Q9H0I9 626 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 WDCPQ9H6R7 721 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 PIGVQ9NUD9 493 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
SCFD1-202ENST00000396629 ARHGEF17Q96PE2 2063 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-202ENST00000396629 THAP12O43422 761 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 MMP20O60882 483 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 GSRP00390 522 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 KRT5P13647 590 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 ARSDP51689 593 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 B4GALNT1Q00973 533 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 LRRC63Q05C16 580 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 CETN1Q12798 172 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 IRF4Q15306 451 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 EFHC2Q5JST6 749 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 OLFML1Q6UWY5 402 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 C11orf57Q6ZUT1 292 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-202ENST00000396629 FAM183BPQ6ZVS7 135 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 SLC26A9Q7LBE3 791 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 ZNF397Q8NF99 534 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-202ENST00000396629 MIB2Q96AX9 1013 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 PGAP3Q96FM1 320 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-202ENST00000396629 RBM15Q96T37 977 aaKnown RBP eCLIP8.54□□□□□ -1.04
SCFD1-202ENST00000396629 OSBPL1AQ9BXW6 950 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 SEMA6CQ9H3T2 930 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 LRRC4CQ9HCJ2 640 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 ATP13A1Q9HD20 1204 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 RRN3Q9NYV6 651 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 PAXBP1Q9Y5B6 917 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 PCDHGA3Q9Y5H0 932 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 ACTL7AQ9Y615 435 aa8.54□□□□□ -1.04
SCFD1-202ENST00000396629 MYO9AB2RTY4 2548 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 ICE1Q9Y2F5 2266 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 TRIM49BA6NDI0 452 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 AGRPO00253 132 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 POP4O95707 220 aaKnown RBP8.53□□□□□ -1.04
SCFD1-202ENST00000396629 LIFP15018 202 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 GNA15P30679 374 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 SRP54P61011 504 aaKnown RBP8.53□□□□□ -1.04
SCFD1-202ENST00000396629 SLC6A3Q01959 620 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 GNA12Q03113 381 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 HLTFQ14527 1009 aaKnown RBP eCLIP8.53□□□□□ -1.041e-7■□□□□ 9.6
SCFD1-202ENST00000396629 NFATC4Q14934 902 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 KLHL40Q2TBA0 621 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 PHF19Q5T6S3 580 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 ZNF658Q5TYW1 1059 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-202ENST00000396629 HIST2H2BCQ6DN03 193 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 ENPP7Q6UWV6 458 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 NYAP1Q6ZVC0 841 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 C9orf43Q8TAL5 461 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-202ENST00000396629 CXorf40AQ8TE69 158 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 JPH3Q8WXH2 748 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-202ENST00000396629 NT5C3BQ969T7 300 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 KLHL32Q96NJ5 620 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 TAAR9Q96RI9 348 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 TM6SF2Q9BZW4 377 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 ACP6Q9NPH0 428 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 AKAP7Q9P0M2 348 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-202ENST00000396629 PLAAQ9Y263 795 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms