RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 TOP1MTQ969P6 601 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 NMUR2Q9GZQ4 415 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 ZNF395Q9H8N7 513 aaPredicted RBP16.29■□□□□ 0.2
SNX6-202ENST00000396526 DNAH12Q6ZR08 3092 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 GJB5O95377 273 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 GSRP00390 522 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 T-ENOLP0DO92 83 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 AGAP9Q5VTM2 703 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 FAM117BQ6P1L5 589 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 SDCCAG8Q86SQ7 713 aaPredicted RBP16.28■□□□□ 0.2
SNX6-202ENST00000396526 ARRDC2Q8TBH0 407 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 TRMT2BQ96GJ1 504 aaKnown RBP16.28■□□□□ 0.2
SNX6-202ENST00000396526 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNX6-202ENST00000396526 ZNF212Q9UDV6 495 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 STK39Q9UEW8 545 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 ARIH1Q9Y4X5 557 aaPredicted RBP16.28■□□□□ 0.2
SNX6-202ENST00000396526 SPECC1L-ADORA2AF8WAN1 911 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 AVPR1AP37288 418 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 HK2P52789 917 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 SIRPB2Q5JXA9 342 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 C1orf53Q5VUE5 145 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 LIPMQ5VYY2 423 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 ZYG11AQ6WRX3 759 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 MRPL17Q9NRX2 175 aaKnown RBP16.28■□□□□ 0.2
SNX6-202ENST00000396526 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.28■□□□□ 0.21e-13■■■■□ 23.8
SNX6-202ENST00000396526 MAFFQ9ULX9 164 aa16.28■□□□□ 0.2
SNX6-202ENST00000396526 LOC285095A0A1B0GVY8 99 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 LYPLA1O75608 230 aaPredicted RBP16.27■□□□□ 0.2
SNX6-202ENST00000396526 MBL2P11226 248 aaPredicted RBP16.27■□□□□ 0.2
SNX6-202ENST00000396526 PPM1AP35813 382 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 CREMQ03060 361 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 RAB33AQ14088 237 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 SLC39A11Q8N1S5 342 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNX6-202ENST00000396526 BLOC1S5Q8TDH9 187 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 CCDC126Q96EE4 140 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 MCMBPQ9BTE3 642 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 HERC2P3Q9BVR0 1158 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 MUC3BQ9H195 1237 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 ARL8BQ9NVJ2 186 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 ITM2AO43736 263 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 SNUPNO95149 360 aaKnown RBP16.27■□□□□ 0.2
SNX6-202ENST00000396526 CRTAMO95727 393 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 NDST3O95803 873 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 IRF1P10914 325 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 CCND1P24385 295 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 ALDH18A1P54886 795 aaKnown RBP16.27■□□□□ 0.2
SNX6-202ENST00000396526 MXRA7P84157 204 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 IRF9Q00978 393 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 FSCBQ5H9T9 825 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 PTAR1Q7Z6K3 402 aaPredicted RBP16.27■□□□□ 0.2
SNX6-202ENST00000396526 ALYREFQ86V81 257 aaKnown RBP16.27■□□□□ 0.2
SNX6-202ENST00000396526 RNF168Q8IYW5 571 aaPredicted RBP16.27■□□□□ 0.2
SNX6-202ENST00000396526 OR7D4Q8NG98 312 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 BRSK1Q8TDC3 778 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 KCTD4Q8WVF5 259 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 SLC7A6OSQ96CW6 309 aaPredicted RBP16.27■□□□□ 0.2
SNX6-202ENST00000396526 MRPL46Q9H2W6 279 aaKnown RBP16.27■□□□□ 0.2
SNX6-202ENST00000396526 MFSD1Q9H3U5 465 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 OXSMQ9NWU1 459 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 TBX21Q9UL17 535 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 SSX2IPQ9Y2D8 614 aa16.27■□□□□ 0.2
SNX6-202ENST00000396526 SLCO1B7G3V0H7 640 aa16.27■□□□□ 0.19
SNX6-202ENST00000396526 PFDN6O15212 129 aa16.27■□□□□ 0.19
SNX6-202ENST00000396526 KDELR3O43731 214 aa16.27■□□□□ 0.19
SNX6-202ENST00000396526 STC2O76061 302 aa16.27■□□□□ 0.19
SNX6-202ENST00000396526 SEC24AO95486 1093 aa16.27■□□□□ 0.19
SNX6-202ENST00000396526 GLP2RO95838 553 aa16.27■□□□□ 0.19
SNX6-202ENST00000396526 CLTBP09497 229 aa16.27■□□□□ 0.19
SNX6-202ENST00000396526 HMGA1P17096 107 aaKnown RBP16.27■□□□□ 0.19
SNX6-202ENST00000396526 RPS24P62847 133 aaKnown RBP16.27■□□□□ 0.19
SNX6-202ENST00000396526 RCN2Q14257 317 aa16.27■□□□□ 0.19
SNX6-202ENST00000396526 SLC14A2Q15849 920 aa16.27■□□□□ 0.19
SNX6-202ENST00000396526 HDAC10Q969S8 669 aa16.27■□□□□ 0.19
SNX6-202ENST00000396526 PSKH2Q96QS6 385 aa16.27■□□□□ 0.19
SNX6-202ENST00000396526 MRPL57Q9BQC6 102 aaKnown RBP16.27■□□□□ 0.19
SNX6-202ENST00000396526 DNAJC28Q9NX36 388 aa16.27■□□□□ 0.19
SNX6-202ENST00000396526 C2orf71A6NGG8 1288 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 CA8P35219 290 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 CTC1Q2NKJ3 1217 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 C6orf163Q5TEZ5 329 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 LRRC8EQ6NSJ5 796 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 DNAJB7Q7Z6W7 309 aaPredicted RBP16.26■□□□□ 0.19
SNX6-202ENST00000396526 GALNT7Q86SF2 657 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 AFAP1L2Q8N4X5 818 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 RMDN1Q96DB5 314 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 TAGLN3Q9UI15 199 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.26■□□□□ 0.19
SNX6-202ENST00000396526 DIAPH2O60879 1101 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 MMP2P08253 660 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 RBP1P09455 135 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 SLC35E2BP0CK96 405 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 ARNTP27540 789 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 GABRB3P28472 473 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 PMLP29590 882 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 SLC6A4P31645 630 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 GLRBP48167 497 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 LEPRP48357 1165 aaKnown RBP16.26■□□□□ 0.19
SNX6-202ENST00000396526 TAS2R39P59534 338 aa16.26■□□□□ 0.19
SNX6-202ENST00000396526 CMTR2Q8IYT2 770 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms