RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 JRKLQ9Y4A0 524 aa10.24□□□□□ -0.77
THUMPD1-202ENST00000396083 ZSCAN5CA6NGD5 496 aaPredicted RBP10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 NEMP1O14524 444 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 KCNK3O14649 394 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 GFRA3O60609 400 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 ZNF217O75362 1048 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 PCDH8O95206 1070 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 IGSF6O95976 241 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 NBL1P41271 181 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 MMP13P45452 471 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 IL10RBQ08334 325 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 PAFAH1B3Q15102 231 aaKnown RBP10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 MYLK3Q32MK0 819 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 ZNF569Q5MCW4 686 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 FBXL19Q6PCT2 694 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 TTC7BQ86TV6 843 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 RCOR2Q8IZ40 523 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 PCDH20Q8N6Y1 951 aaKnown RBP10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 UBL4BQ8N7F7 174 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 SUMF1Q8NBK3 374 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 EXD1Q8NHP7 514 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 NSMCE1Q8WV22 266 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 RBM41Q96IZ5 413 aaKnown RBP10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 GDAP1L1Q96MZ0 367 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 ALS2CR12Q96Q35 445 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 SMIM14Q96QK8 99 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 RBM22Q9NW64 420 aaKnown RBP eCLIP10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 WSB2Q9NYS7 404 aaPredicted RBP10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 UBP1Q9NZI7 540 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 C1QTNF3-AMACRE9PGA6 284 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 DDX3YO15523 660 aaKnown RBP10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 LILRB5O75023 590 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 ERLIN1O75477 346 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 PEX11BO96011 259 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 CCNB1P14635 433 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 PRLRP16471 622 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 HOXA6P31267 233 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 ZNF135P52742 658 aaPredicted RBP10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 GEMIN4P57678 1058 aaKnown RBP10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 PPP2CBP62714 309 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 PPP2CAP67775 309 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 DSC2Q02487 901 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 ZBTB17Q13105 803 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 CFAP58Q5T655 872 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 TMCO4Q5TGY1 634 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 SLC9A4Q6AI14 798 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 DSG4Q86SJ6 1040 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 RNF10Q8N5U6 811 aaKnown RBP10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 KDM1BQ8NB78 822 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 ACTL9Q8TC94 416 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 ATG4AQ8WYN0 398 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 PABPC3Q9H361 631 aaKnown RBP10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 USP36Q9P275 1121 aaKnown RBP10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 RAB21Q9UL25 225 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 NCKAP1Q9Y2A7 1128 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 FREM2Q5SZK8 3169 aa10.23□□□□□ -0.77
THUMPD1-202ENST00000396083 CCDC163A0A0D9SF12 145 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 MEI4A8MW99 385 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 SEMA4FO95754 770 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 OTUD4Q01804 1114 aaKnown RBP10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 GALNT2Q10471 571 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 E2F5Q15329 346 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 RPS6KA1Q15418 735 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 INO80DQ53TQ3 878 aaPredicted RBP10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 DENND2CQ68D51 928 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 PARS2Q7L3T8 475 aaKnown RBP10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 LPCAT2Q7L5N7 544 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 FAM122AQ96E09 287 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 SEMA3CQ99985 751 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 NOD2Q9HC29 1040 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 FZD3Q9NPG1 666 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 RXFP3Q9NSD7 469 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 CA5BQ9Y2D0 317 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 H7C0C1 242 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 SLC31A1O15431 190 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 PRNPP04156 253 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 CFIP05156 583 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 C5AR1P21730 350 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 ATP5OP48047 213 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 ADPRHP54922 357 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 SF3A2Q15428 464 aaKnown RBP10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 PRAMEF14Q5SWL7 426 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 SYCP2LQ5T4T6 812 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 AGBL4Q5VU57 503 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 PMS2CLQ68D20 193 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 ZSWIM9Q86XI8 627 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 CEP112Q8N8E3 955 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 BIRC7Q96CA5 298 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 HES6Q96HZ4 224 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 WRAP53Q9BUR4 548 aaKnown RBP10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 CAAP1Q9H8G2 361 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 SMARCAL1Q9NZC9 954 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 SEPT3Q9UH03 358 aa10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 R3HDM2Q9Y2K5 976 aaKnown RBP10.22□□□□□ -0.77
THUMPD1-202ENST00000396083 C16orf96A6NNT2 1141 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 POP4O95707 220 aaKnown RBP10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 HLA-DQB2P05538 268 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 CORO7P57737 925 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 RAD51Q06609 339 aa10.21□□□□□ -0.77
THUMPD1-202ENST00000396083 SNX1Q13596 522 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms