RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 NAGLUP54802 743 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 BNIP2Q12982 314 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 PRKG2Q13237 762 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 TOMM20Q15388 145 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 CCDC157Q569K6 752 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 SMYD1Q8NB12 490 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 DDX4Q9NQI0 724 aaKnown RBP5.5□□□□□ -1.53
VPS13C-204ENST00000395898 RAP2CQ9Y3L5 183 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 SLIT3O75094 1523 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 PRG2P13727 222 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 EPORP19235 508 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 STAT5AP42229 794 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 IFI35P80217 286 aaPredicted RBP5.5□□□□□ -1.53
VPS13C-204ENST00000395898 TTC23Q5W5X9 447 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 CXCL17Q6UXB2 119 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 TTC7BQ86TV6 843 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 AMER2Q8N7J2 671 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 OR52K1Q8NGK4 314 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 TRAPPC12Q8WVT3 735 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 DUSP16Q9BY84 665 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 ROGDIQ9GZN7 287 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 POLR1BQ9H9Y6 1135 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 PIH1D1Q9NWS0 290 aaKnown RBP5.5□□□□□ -1.53
VPS13C-204ENST00000395898 TBC1D30Q9Y2I9 924 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 ATRNO75882 1429 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 MYO18AQ92614 2054 aaKnown RBP5.5□□□□□ -1.53
VPS13C-204ENST00000395898 OR10H2O60403 315 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 PRMT3O60678 531 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 UNC5CO95185 931 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 FGF1P05230 155 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 ATP6V0D1P61421 351 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 ZACNQ401N2 412 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 ZNF57Q68EA5 555 aaPredicted RBP5.5□□□□□ -1.53
VPS13C-204ENST00000395898 ABRAXAS1Q6UWZ7 409 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 ZCCHC23Q6ZST2 131 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 FAM220AQ7Z4H9 259 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 GPR142Q7Z601 462 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 MON1AQ86VX9 555 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 DENND1CQ8IV53 801 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 SLC41A1Q8IVJ1 513 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 KIAA0319LQ8IZA0 1049 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 BHLHE22Q8NFJ8 381 aaPredicted RBP5.5□□□□□ -1.53
VPS13C-204ENST00000395898 ALG9Q9H6U8 611 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 SEMA4BQ9NPR2 832 aaPredicted RBP5.5□□□□□ -1.53
VPS13C-204ENST00000395898 ARMCX1Q9P291 453 aa5.5□□□□□ -1.53
VPS13C-204ENST00000395898 TMEM150BA6NC51 233 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SPATA31C2B4DYI2 1134 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ADH1CP00326 375 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 HLA-DQA2P01906 255 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 TGFBR2P37173 567 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CASP5P51878 434 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ITGB3BPQ13352 177 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 C15orf59Q2T9L4 293 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CES3Q6UWW8 571 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 KRT74Q7RTS7 529 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RGL4Q8IZJ4 473 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 OR7A2PQ8NGA2 310 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 HAS1Q92839 578 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ITCHQ96J02 903 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MFSD1Q9H3U5 465 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CHST7Q9NS84 486 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MSRAQ9UJ68 235 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ANGPT4Q9Y264 503 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 PXDNQ92626 1479 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SMIM35A0A1B0GVV1 85 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 TGDSO95455 350 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 IL1BP01584 269 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 FAM153BP0C7A2 387 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 PPIBP23284 216 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SLC6A2P23975 617 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CCR3P51677 355 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MARSP56192 900 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MTAPQ13126 283 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 NOGQ13253 232 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 FAM153CQ494X1 144 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RAET1GQ6H3X3 334 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 VSTM1Q6UX27 236 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 DEFB132Q7Z7B7 95 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 HJURPQ8NCD3 748 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SMAD5Q99717 465 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 PAIP1Q9H074 479 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RNPEPQ9H4A4 650 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SOHLH2Q9NX45 425 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 ZNHIT2Q9UHR6 403 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 MRPS23Q9Y3D9 190 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 TLR5O60602 858 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 CACNA2D1P54289 1103 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 OLR1P78380 273 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SP3Q02447 781 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 NRF1Q16656 503 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 KLHL35Q6PF15 583 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 REM2Q8IYK8 340 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 PTCD2Q8WV60 388 aaKnown RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 COL26A1Q96A83 441 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 HOPXQ9BPY8 73 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 GLIS2Q9BZE0 524 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 DAPK2Q9UIK4 370 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 PTCH2Q9Y6C5 1203 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 NCANO14594 1321 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 SLC15A5A6NIM6 579 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms