RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 ZNF317Q96PQ6 595 aaPredicted RBP19.52■□□□□ 0.71
LMNB1-202ENST00000395354 TRIM56Q9BRZ2 755 aaKnown RBP19.52■□□□□ 0.71
LMNB1-202ENST00000395354 KIFC1Q9BW19 673 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 ARNT2Q9HBZ2 717 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 HPS4Q9NQG7 708 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 PIH1D1Q9NWS0 290 aaKnown RBP19.52■□□□□ 0.71
LMNB1-202ENST00000395354 UBP1Q9NZI7 540 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.51■□□□□ 0.71
LMNB1-202ENST00000395354 ERICH4A6NGS2 130 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 TM9SF1O15321 606 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 MT-CYBP00156 380 aaPredicted RBP19.51■□□□□ 0.71
LMNB1-202ENST00000395354 ETFBP38117 255 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 SGSHP51688 502 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 IL9RQ01113 521 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 SLC18A2Q05940 514 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 SLC10A7Q0GE19 358 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 ZNF177Q13360 481 aaPredicted RBP19.51■□□□□ 0.71
LMNB1-202ENST00000395354 OLIG2Q13516 323 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 RUNX3Q13761 415 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 LBRQ14739 615 aaKnown RBP19.51■□□□□ 0.71
LMNB1-202ENST00000395354 ANKRD20A4Q4UJ75 823 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 PCID2Q5JVF3 399 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 CERCAMQ5T4B2 595 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 KDELC1Q6UW63 502 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 RANBP10Q6VN20 620 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 ZNF783Q6ZMS7 281 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 C4orf33Q8N1A6 199 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 BANPQ8N9N5 519 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 HJURPQ8NCD3 748 aaPredicted RBP19.51■□□□□ 0.71
LMNB1-202ENST00000395354 BHMTQ93088 406 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 TADA1Q96BN2 335 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 CERS2Q96G23 380 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 ECT2Q9H8V3 914 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 PDFQ9HBH1 243 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 MRM3Q9HC36 420 aaKnown RBP19.51■□□□□ 0.71
LMNB1-202ENST00000395354 NT5MQ9NPB1 228 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 GTSE1Q9NYZ3 720 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 TBC1D30Q9Y2I9 924 aa19.51■□□□□ 0.71
LMNB1-202ENST00000395354 TYW5A2RUC4 315 aaKnown RBP19.5■□□□□ 0.71
LMNB1-202ENST00000395354 OTOL1A6NHN0 477 aaPredicted RBP19.5■□□□□ 0.71
LMNB1-202ENST00000395354 TBL1XO60907 577 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 ADH1CP00326 375 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 CYP17A1P05093 508 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 ACVRL1P37023 503 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 PPARDQ03181 441 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 TDGQ13569 410 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 DENND5AQ6IQ26 1287 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 TIFABQ6ZNK6 161 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 SH2D5Q6ZV89 423 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 BBS5Q8N3I7 341 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 IPMKQ8NFU5 416 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 MGARPQ8TDB4 240 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 ZNF473Q8WTR7 871 aaKnown RBP19.5■□□□□ 0.71
LMNB1-202ENST00000395354 MRGPRX2Q96LB1 330 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 FICDQ9BVA6 458 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 BBS2Q9BXC9 721 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 FSD1LQ9BXM9 530 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 PLK2Q9NYY3 685 aa19.5■□□□□ 0.71
LMNB1-202ENST00000395354 ZCWPW2A0A1B0GU75 182 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 TRIM49D1C9J1S8 452 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 NEDD8-MDP1E9PL57 170 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 ARNTLO00327 626 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 KDELR3O43731 214 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 SPAG7O75391 227 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 ASMTLO95671 621 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 CA4P22748 312 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 RFTN1Q14699 578 aaPredicted RBP19.49■□□□□ 0.71
LMNB1-202ENST00000395354 SLC14A2Q15849 920 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 MPP7Q5T2T1 576 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 FYB2Q5VWT5 728 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 CPA6Q8N4T0 437 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 TTC8Q8TAM2 541 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 ZNF669Q96BR6 464 aaPredicted RBP19.49■□□□□ 0.71
LMNB1-202ENST00000395354 MAGEB18Q96M61 343 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 FCRL3Q96P31 734 aaPredicted RBP19.49■□□□□ 0.71
LMNB1-202ENST00000395354 APOL2Q9BQE5 337 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 ATP13A1Q9HD20 1204 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 MKS1Q9NXB0 559 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 MARK1Q9P0L2 795 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 KIF26AQ9ULI4 1882 aaPredicted RBP19.49■□□□□ 0.71
LMNB1-202ENST00000395354 ATP9BO43861 1147 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 PENKP01210 267 aaPredicted RBP19.49■□□□□ 0.71
LMNB1-202ENST00000395354 RHOCP08134 193 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 ADH5P11766 374 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 DRD4P21917 467 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 HOXD9P28356 352 aaPredicted RBP19.49■□□□□ 0.71
LMNB1-202ENST00000395354 WNT3AP56704 352 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 LRRC14Q15048 493 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 ITPRIPL2Q3MIP1 535 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 ALG1LQ6GMV1 187 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 PKN3Q6P5Z2 889 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 CSGALNACT1Q8TDX6 532 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 CPNE1Q99829 537 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 POLR1EQ9GZS1 481 aaKnown RBP19.49■□□□□ 0.71
LMNB1-202ENST00000395354 ZFATQ9P243 1243 aa19.49■□□□□ 0.71
LMNB1-202ENST00000395354 PMPCBO75439 489 aa19.48■□□□□ 0.71
LMNB1-202ENST00000395354 TYRP14679 529 aa19.48■□□□□ 0.71
LMNB1-202ENST00000395354 RPA3P35244 121 aaPredicted RBP19.48■□□□□ 0.71
LMNB1-202ENST00000395354 CCNFP41002 786 aa19.48■□□□□ 0.71
LMNB1-202ENST00000395354 OXCT1P55809 520 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms