RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 DRC7Q8IY82 874 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 NELFBQ8WX92 580 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 SHC3Q92529 594 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 CRACR2AQ9BSW2 395 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 FUCA2Q9BTY2 467 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.05■□□□□ 0.16
SNCA-205ENST00000394991 FOXJ2Q9P0K8 574 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 CTNND2Q9UQB3 1225 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 LOXL2Q9Y4K0 774 aa16.05■□□□□ 0.16
SNCA-205ENST00000394991 TEX15Q9BXT5 2789 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 PRAMEF33A0A0G2JMD5 474 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 PPP1R3GB7ZBB8 358 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 TMX2-CTNND1H3BSU7 103 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 AGRPO00253 132 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 PRAMEF10O60809 474 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 MMP20O60882 483 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 SRGAP2O75044 1071 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 UGT2B4P06133 528 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 JMJD7P0C870 316 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 ITIH2P19823 946 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 TLE1Q04724 770 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 CLCA4Q14CN2 919 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 ALG11Q2TAA5 492 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 MANEAQ5SRI9 462 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 TRNP1Q6NT89 227 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 TRIM65Q6PJ69 517 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 FOXR2Q6PJQ5 311 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 PLPP6Q8IY26 295 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 FSTL5Q8N475 847 aaPredicted RBP16.04■□□□□ 0.16
SNCA-205ENST00000394991 RYBPQ8N488 228 aaPredicted RBP16.04■□□□□ 0.16
SNCA-205ENST00000394991 TSACCQ96A04 125 aaPredicted RBP16.04■□□□□ 0.16
SNCA-205ENST00000394991 ISG20Q96AZ6 181 aaKnown RBP16.04■□□□□ 0.16
SNCA-205ENST00000394991 KLHL32Q96NJ5 620 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 TMEM74Q96NL1 305 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 EPAS1Q99814 870 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 LRRN3Q9H3W5 708 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 PLCB1Q9NQ66 1216 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 ANKMY1Q9P2S6 941 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 AJAP1Q9UKB5 411 aaPredicted RBP16.04■□□□□ 0.16
SNCA-205ENST00000394991 STAP1Q9ULZ2 295 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 DOLKQ9UPQ8 538 aa16.04■□□□□ 0.16
SNCA-205ENST00000394991 USP9YO00507 2555 aaPredicted RBP16.04■□□□□ 0.16
SNCA-205ENST00000394991 KRIT1O00522 736 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 SLC9A1P19634 815 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 HK3P52790 923 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 STX17P56962 302 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 IRF4Q15306 451 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 ELOCQ15369 112 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 KCTD16Q68DU8 428 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 DTX1Q86Y01 620 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 HID1Q8IV36 788 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 ARHGEF2Q92974 986 aaKnown RBP16.03■□□□□ 0.16
SNCA-205ENST00000394991 EDEM3Q9BZQ6 932 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 ZYG11BQ9C0D3 744 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 SYNCQ9H7C4 482 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 NDFIP2Q9NV92 336 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 GPR34Q9UPC5 381 aa16.03■□□□□ 0.16
SNCA-205ENST00000394991 SPTAN1Q13813 2472 aaKnown RBP16.03■□□□□ 0.16
SNCA-205ENST00000394991 C9orf172C9J069 976 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 TOR1BO14657 336 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 PPFIA2O75334 1257 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 TM7SF2O76062 418 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 GNA14O95837 355 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 GSRP00390 522 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 F9P00740 461 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 ALPIP09923 528 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 SFTPCP11686 197 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 FLT3P36888 993 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 ZFP36L1Q07352 338 aaKnown RBP16.02■□□□□ 0.16
SNCA-205ENST00000394991 KLHL40Q2TBA0 621 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 SLC25A52Q3SY17 297 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 ATXN7L2Q5T6C5 722 aaPredicted RBP16.02■□□□□ 0.16
SNCA-205ENST00000394991 LVRNQ6Q4G3 990 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 LEKR1Q6ZMV7 388 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 TMPRSS9Q7Z410 1059 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 BNIPLQ7Z465 357 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 CCNJLQ8IV13 435 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 OR2AP1Q8NGE2 309 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 ARHGEF26Q96DR7 871 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 HAPLN3Q96S86 360 aa16.02■□□□□ 0.16
SNCA-205ENST00000394991 RELNP78509 3460 aa16.02■□□□□ 0.15
SNCA-205ENST00000394991 FAM170AA1A519 330 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 RASGRP1O95267 797 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 PNMA6AP0CW24 399 aaPredicted RBP16.01■□□□□ 0.15
SNCA-205ENST00000394991 PPP1R2P41236 205 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 BLKP51451 505 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 WSCD2Q2TBF2 565 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 MYLK3Q32MK0 819 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 ACBD5Q5T8D3 534 aaPredicted RBP16.01■□□□□ 0.15
SNCA-205ENST00000394991 TTC7BQ86TV6 843 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 SLC47A2Q86VL8 602 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 FAM131BQ86XD5 332 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 ZDHHC17Q8IUH5 632 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 SFTPA2Q8IWL1 248 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 Q8N9G6 341 aaPredicted RBP16.01■□□□□ 0.15
SNCA-205ENST00000394991 GPR156Q8NFN8 814 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 CXorf40AQ8TE69 158 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 SCG3Q8WXD2 468 aaKnown RBP16.01■□□□□ 0.15
SNCA-205ENST00000394991 USP7Q93009 1102 aa16.01■□□□□ 0.15
SNCA-205ENST00000394991 WRAP53Q9BUR4 548 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms