RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ALDH1A2O94788 518 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 F7P08709 466 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 WARSP23381 471 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 C2orf69Q8N8R5 385 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 SPATA22Q8NHS9 363 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 SNRNP27Q8WVK2 155 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 GATA6Q92908 595 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 KCNN1Q92952 543 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 UNC93B1Q9H1C4 597 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 TMPRSS4Q9NRS4 437 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 ABCC13Q9NSE7 274 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 CRYL1Q9Y2S2 319 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 YJEFN3A6XGL0 299 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 NPHS1O60500 1241 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 IPO13O94829 963 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 CRTAMO95727 393 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 NFKBIAP25963 317 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 WNT3AP56704 352 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 CCNIQ14094 377 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 PSMD5Q16401 504 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 EML3Q32P44 896 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 TAF2Q6P1X5 1199 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 FAM81AQ8TBF8 368 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 LPGAT1Q92604 370 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 KCTD14Q9BQ13 255 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 TMCO1Q9UM00 188 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 VPS9D1Q9Y2B5 631 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 TRAF6Q9Y4K3 522 aa11.77□□□□□ -0.53
UBE2D3-209ENST00000394804 MATN2O00339 956 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 GPR182O15218 404 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 TSPAN8P19075 237 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 RAB27AP51159 221 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 ADARP55265 1226 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 TAS2R39P59534 338 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 CYP51A1Q16850 503 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 GNASQ5JWF2 1037 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 ANKS6Q68DC2 871 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 ESRP1Q6NXG1 681 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 MIB1Q86YT6 1006 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 LRRC49Q8IUZ0 686 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 HERC6Q8IVU3 1022 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 DENND6AQ8IWF6 608 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 FBXO39Q8N4B4 442 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 EFHBQ8N7U6 833 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 ZNF555Q8NEP9 628 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 MYLPFQ96A32 169 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 NPY6RQ99463 290 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 CASS4Q9NQ75 786 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 RSL24D1Q9UHA3 163 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 TRMT6Q9UJA5 497 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 LBPP18428 481 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 CA8P35219 290 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 RALGDSQ12967 914 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 TRIM25Q14258 630 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 C10orf120Q5SQS8 335 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 TRNP1Q6NT89 227 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 PTGR2Q8N8N7 351 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 TERB1Q8NA31 727 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 FAM156AQ8NDB6 213 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 PPP1R10Q96QC0 940 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 TCF12Q99081 682 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 GPR22Q99680 433 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 NUDT5Q9UKK9 219 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 ADAMTS6Q9UKP5 1117 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 TCAF1Q9Y4C2 921 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 TBC1D4O60343 1298 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 MT-CYBP00156 380 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 LDLRP01130 860 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 ARHGDIAP52565 204 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 ZNF460Q14592 562 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 FAM45BPQ6NSW5 357 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 KIAA0408Q6ZU52 694 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 ZC3HC1Q86WB0 502 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 DHRSXQ8N5I4 330 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 FAM45AQ8TCE6 357 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 SNX10Q9Y5X0 201 aa11.76□□□□□ -0.53
UBE2D3-209ENST00000394804 VPS26AO75436 327 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 TADA2AO75478 443 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 POMCP01189 267 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 CHRM3P20309 590 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 CCNCP24863 283 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 RPS6KA3P51812 740 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 MCCD1P59942 119 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 EFEMP1Q12805 493 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 BRMS1LQ5PSV4 323 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 OR52E8Q6IFG1 317 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 IFNLR1Q8IU57 520 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 KBTBD2Q8IY47 623 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 AHI1Q8N157 1196 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 OSCP1Q8WVF1 389 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 DCUN1D5Q9BTE7 237 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 BEGAINQ9BUH8 593 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 TXNRD2Q9NNW7 524 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 NDFIP2Q9NV92 336 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 VWA7Q9Y334 891 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 PCNTO95613 3336 aa11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 NCF1BA6NI72 391 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 NCF1CA8MVU1 366 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-209ENST00000394804 IQCF3P0C7M6 154 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms