RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SEPT6Q14141 434 aa15.1■□□□□ 0.01
CCT4-201ENST00000394440 MPP7Q5T2T1 576 aa15.1■□□□□ 0.01
CCT4-201ENST00000394440 FAM47EQ6ZV65 393 aa15.1■□□□□ 0.01
CCT4-201ENST00000394440 MICALCLQ6ZW33 695 aa15.1■□□□□ 0.01
CCT4-201ENST00000394440 ZC3HC1Q86WB0 502 aaKnown RBP15.1■□□□□ 0.01
CCT4-201ENST00000394440 OR13J1Q8NGT2 312 aa15.1■□□□□ 0.01
CCT4-201ENST00000394440 GRAMD1AQ96CP6 724 aa15.1■□□□□ 0.01
CCT4-201ENST00000394440 VPS39Q96JC1 886 aa15.1■□□□□ 0.01
CCT4-201ENST00000394440 CABS1Q96KC9 395 aa15.1■□□□□ 0.01
CCT4-201ENST00000394440 NOD2Q9HC29 1040 aa15.1■□□□□ 0.01
CCT4-201ENST00000394440 SNX15Q9NRS6 342 aa15.1■□□□□ 0.01
CCT4-201ENST00000394440 GGT7Q9UJ14 662 aa15.1■□□□□ 0.01
CCT4-201ENST00000394440 MTO1Q9Y2Z2 717 aaKnown RBP15.1■□□□□ 0.01
CCT4-201ENST00000394440 INSIG1O15503 277 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 GLRA3O75311 464 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 SERPINB8P50452 374 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 INO80DQ53TQ3 878 aaPredicted RBP15.09■□□□□ 0.01
CCT4-201ENST00000394440 YTHDF3Q7Z739 585 aaKnown RBP15.09■□□□□ 0.01
CCT4-201ENST00000394440 DCAF4L2Q8NA75 395 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 TDRD5Q8NAT2 981 aaKnown RBP15.09■□□□□ 0.01
CCT4-201ENST00000394440 TCEAL4Q96EI5 215 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 GPR22Q99680 433 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 PITPNM3Q9BZ71 974 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 RHOJQ9H4E5 214 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 EMCNQ9ULC0 261 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 PHTF1Q9UMS5 762 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 COLQQ9Y215 455 aaPredicted RBP15.09■□□□□ 0.01
CCT4-201ENST00000394440 STARD13Q9Y3M8 1113 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 CHD9Q3L8U1 2897 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 LDB2O43679 373 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 FGF19O95750 216 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 EPCAMP16422 314 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 DDX6P26196 483 aaKnown RBP eCLIP15.09■□□□□ 0.01
CCT4-201ENST00000394440 CSKP41240 450 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 ACVR1Q04771 509 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 SPATA21Q7Z572 469 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 CMC1Q7Z7K0 106 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 IFT43Q96FT9 208 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 NUDCD1Q96RS6 583 aa15.09■□□□□ 0.01
CCT4-201ENST00000394440 USP15Q9Y4E8 981 aaPredicted RBP15.09■□□□□ 0.01
CCT4-201ENST00000394440 WDR91A4D1P6 747 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 CLASP2O75122 1294 aaKnown RBP15.08■□□□□ 0.01
CCT4-201ENST00000394440 TMCC1O94876 653 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 NDST3O95803 873 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 AHSGP02765 367 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 PRKCGP05129 697 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 PTPN2P17706 415 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 CES1P23141 567 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 TYK2P29597 1187 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 ABCG1P45844 678 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 CDH18Q13634 790 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 INSCQ1MX18 579 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 KYAT3Q6YP21 454 aaKnown RBP15.08■□□□□ 0.01
CCT4-201ENST00000394440 MFN1Q8IWA4 741 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 DENND6AQ8IWF6 608 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 C2CD4AQ8NCU7 369 aaPredicted RBP15.08■□□□□ 0.01
CCT4-201ENST00000394440 ARMC2Q8NEN0 867 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 ACVR1CQ8NER5 493 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 RIN3Q8TB24 985 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 PEX13Q92968 403 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 ATXN7L3BQ96GX2 97 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 EXOC2Q96KP1 924 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 TDRD1Q9BXT4 1180 aaKnown RBP15.08■□□□□ 0.01
CCT4-201ENST00000394440 MANSC1Q9H8J5 431 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 LHX3Q9UBR4 397 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 VPS51Q9UID3 782 aa15.08■□□□□ 0.01
CCT4-201ENST00000394440 CEP290O15078 2479 aa15.08■□□□□ 0
CCT4-201ENST00000394440 KLF11O14901 512 aa15.08■□□□□ 0
CCT4-201ENST00000394440 GSRP00390 522 aa15.08■□□□□ 0
CCT4-201ENST00000394440 PRLP01236 227 aa15.08■□□□□ 0
CCT4-201ENST00000394440 RHOP08100 348 aa15.08■□□□□ 0
CCT4-201ENST00000394440 SLC1A2P43004 574 aa15.08■□□□□ 0
CCT4-201ENST00000394440 UGP2Q16851 508 aa15.08■□□□□ 0
CCT4-201ENST00000394440 SLC5A9Q2M3M2 681 aa15.08■□□□□ 0
CCT4-201ENST00000394440 MPPE1Q53F39 396 aa15.08■□□□□ 0
CCT4-201ENST00000394440 PPM1JQ5JR12 505 aa15.08■□□□□ 0
CCT4-201ENST00000394440 GPR158Q5T848 1215 aa15.08■□□□□ 0
CCT4-201ENST00000394440 FYB2Q5VWT5 728 aa15.08■□□□□ 0
CCT4-201ENST00000394440 FAM109BQ6ICB4 259 aaPredicted RBP15.08■□□□□ 0
CCT4-201ENST00000394440 LINGO4Q6UY18 593 aa15.08■□□□□ 0
CCT4-201ENST00000394440 CHRDL2Q6WN34 429 aa15.08■□□□□ 0
CCT4-201ENST00000394440 NLRP9Q7RTR0 991 aa15.08■□□□□ 0
CCT4-201ENST00000394440 CMTM8Q8IZV2 173 aa15.08■□□□□ 0
CCT4-201ENST00000394440 MICAL1Q8TDZ2 1067 aa15.08■□□□□ 0
CCT4-201ENST00000394440 FAM167BQ9BTA0 163 aa15.08■□□□□ 0
CCT4-201ENST00000394440 SMG9Q9H0W8 520 aaKnown RBP15.08■□□□□ 0
CCT4-201ENST00000394440 SIRPGQ9P1W8 387 aa15.08■□□□□ 0
CCT4-201ENST00000394440 VPS28Q9UK41 221 aa15.08■□□□□ 0
CCT4-201ENST00000394440 CCL26Q9Y258 94 aa15.08■□□□□ 0
CCT4-201ENST00000394440 NUP210Q8TEM1 1887 aaPredicted RBP15.07■□□□□ 0
CCT4-201ENST00000394440 E2F8A0AVK6 867 aa15.07■□□□□ 0
CCT4-201ENST00000394440 IL1BP01584 269 aa15.07■□□□□ 0
CCT4-201ENST00000394440 HNRNPA1P09651 372 aaKnown RBP eCLIP15.07■□□□□ 0
CCT4-201ENST00000394440 HADHAP40939 763 aa15.07■□□□□ 0
CCT4-201ENST00000394440 SCNN1BP51168 640 aa15.07■□□□□ 0
CCT4-201ENST00000394440 IFT88Q13099 833 aa15.07■□□□□ 0
CCT4-201ENST00000394440 GALNT3Q14435 633 aa15.07■□□□□ 0
CCT4-201ENST00000394440 GRM3Q14832 879 aa15.07■□□□□ 0
CCT4-201ENST00000394440 TEAD2Q15562 447 aa15.07■□□□□ 0
CCT4-201ENST00000394440 OTOAQ7RTW8 1153 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms