RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CDH6P55285 790 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 PSME3P61289 254 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 TTLL4Q14679 1199 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 TAF5Q15542 800 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 PPP6R3Q5H9R7 873 aaPredicted RBP19.04■□□□□ 0.64
HOXC6-202ENST00000394331 HEATR4Q86WZ0 1026 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 ISL2Q96A47 359 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 ZNF486Q96H40 463 aaPredicted RBP19.04■□□□□ 0.64
HOXC6-202ENST00000394331 MAGED4Q96JG8 741 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 ILKAPQ9H0C8 392 aaPredicted RBP19.04■□□□□ 0.64
HOXC6-202ENST00000394331 R3HDMLQ9H3Y0 253 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 CPNE5Q9HCH3 593 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 VTI1BQ9UEU0 232 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 HEATR9A2RTY3 570 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 CKMT2P17540 419 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 ADAM17P78536 824 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 USP43Q70EL4 1123 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 SLC7A14Q8TBB6 771 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 COPS5Q92905 334 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 GDAP2Q9NXN4 497 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 RAP2CQ9Y3L5 183 aa19.04■□□□□ 0.64
HOXC6-202ENST00000394331 TPSB2P20231 275 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 KRT6CP48668 564 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 NRLP54845 237 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 TPSAB1Q15661 275 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 SEL1L3Q68CR1 1132 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 TFAP2DQ7Z6R9 452 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.03■□□□□ 0.64
HOXC6-202ENST00000394331 PDGFRAP16234 1089 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 MAGEA12P43365 314 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 INCA1Q0VD86 236 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 TMEM132DQ14C87 1099 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 GTF2IRD2BQ6EKJ0 949 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 ZNF534Q76KX8 674 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 GTF2IRD2Q86UP8 949 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 ERO1BQ86YB8 467 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 GOLM1Q8NBJ4 401 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 CHAC2Q8WUX2 184 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 LPGAT1Q92604 370 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 CDKL2Q92772 493 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 C9orf16Q9BUW7 83 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 ELP3Q9H9T3 547 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 ADA2Q9NZK5 511 aa19.03■□□□□ 0.64
HOXC6-202ENST00000394331 C2CD4BA6NLJ0 364 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 PRPSAP2O60256 369 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 RBP5P82980 135 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 BTBD8Q5XKL5 378 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 LCLAT1Q6UWP7 414 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 DCP2Q8IU60 420 aaKnown RBP19.02■□□□□ 0.64
HOXC6-202ENST00000394331 GALNT13Q8IUC8 556 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 UBA3Q8TBC4 463 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 RXFP2Q8WXD0 754 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 TMA16Q96EY4 203 aaKnown RBP19.02■□□□□ 0.64
HOXC6-202ENST00000394331 GLT1D1Q96MS3 346 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 PEBP4Q96S96 227 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 RBPJLQ9UBG7 517 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 CD300AQ9UGN4 299 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 RAD54BQ9Y620 910 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 LRRC37A2A6NM11 1700 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 IGBP1P78318 339 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 CHRNEQ04844 493 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 NSUN2Q08J23 767 aaKnown RBP eCLIP19.02■□□□□ 0.64
HOXC6-202ENST00000394331 PDK2Q15119 407 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 STILQ15468 1287 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 MAPRE1Q15691 268 aaKnown RBP19.02■□□□□ 0.64
HOXC6-202ENST00000394331 AMHR2Q16671 573 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 SLC10A6Q3KNW5 377 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 INAVAQ3KP66 663 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 CCNYL2Q5T2Q4 361 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 OR6B2Q6IFH4 312 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 SULF1Q8IWU6 871 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 CBR4Q8N4T8 237 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 FAM156AQ8NDB6 213 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 MTG1Q9BT17 334 aaPredicted RBP19.02■□□□□ 0.64
HOXC6-202ENST00000394331 TXNRD2Q9NNW7 524 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 PKD2L2Q9NZM6 624 aa19.02■□□□□ 0.64
HOXC6-202ENST00000394331 A0A087WZ62 844 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 FAM172BPA6NC97 362 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 GUCY1B2O75343 617 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 STAU1O95793 577 aaKnown RBP19.01■□□□□ 0.63
HOXC6-202ENST00000394331 INSRRP14616 1297 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 TCN1P20061 433 aaPredicted RBP19.01■□□□□ 0.63
HOXC6-202ENST00000394331 EEF1DP29692 281 aaKnown RBP19.01■□□□□ 0.63
HOXC6-202ENST00000394331 TNK2Q07912 1038 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 DPH6Q7L8W6 267 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 AKAP14Q86UN6 197 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 DCPSQ96C86 337 aaKnown RBP19.01■□□□□ 0.63
HOXC6-202ENST00000394331 FDXACB1Q9BRP7 624 aaPredicted RBP19.01■□□□□ 0.63
HOXC6-202ENST00000394331 MROH8Q9H579 483 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 SP140LQ9H930 580 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 TTC34A8MYJ7 566 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 H7C0C1 242 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 SCO2O43819 266 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 ATP5OP48047 213 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 NDST1P52848 882 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 MMRN1Q13201 1228 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 ATP6AP1Q15904 470 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 BOLA3Q53S33 107 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 ATAD3BQ5T9A4 648 aa19.01■□□□□ 0.63
HOXC6-202ENST00000394331 USP51Q70EK9 711 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms