RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 IL4RP24394 825 aa31.09■■■□□ 2.57
CMTM4-202ENST00000394106 SERPINB6P35237 376 aa31.09■■■□□ 2.57
CMTM4-202ENST00000394106 ARRB1P49407 418 aaPredicted RBP31.09■■■□□ 2.57
CMTM4-202ENST00000394106 SHBQ15464 509 aa31.09■■■□□ 2.57
CMTM4-202ENST00000394106 ZFYVE27Q5T4F4 411 aa31.09■■■□□ 2.57
CMTM4-202ENST00000394106 CFAP58Q5T655 872 aa31.09■■■□□ 2.57
CMTM4-202ENST00000394106 TMCO4Q5TGY1 634 aa31.09■■■□□ 2.57
CMTM4-202ENST00000394106 TC2NQ8N9U0 490 aa31.09■■■□□ 2.57
CMTM4-202ENST00000394106 SUV39H2Q9H5I1 410 aa31.09■■■□□ 2.57
CMTM4-202ENST00000394106 BUB1BO60566 1050 aaPredicted RBP31.08■■■□□ 2.57
CMTM4-202ENST00000394106 ITIH2P19823 946 aa31.08■■■□□ 2.57
CMTM4-202ENST00000394106 MAN1A1P33908 653 aa31.08■■■□□ 2.57
CMTM4-202ENST00000394106 GRK6P43250 576 aa31.08■■■□□ 2.57
CMTM4-202ENST00000394106 ARSEP51690 589 aa31.08■■■□□ 2.57
CMTM4-202ENST00000394106 DPYSL3Q14195 570 aa31.08■■■□□ 2.57
CMTM4-202ENST00000394106 LBRQ14739 615 aaKnown RBP31.08■■■□□ 2.57
CMTM4-202ENST00000394106 GCNT7Q6ZNI0 430 aa31.08■■■□□ 2.57
CMTM4-202ENST00000394106 CAMK1DQ8IU85 385 aa31.08■■■□□ 2.57
CMTM4-202ENST00000394106 ATPAF2Q8N5M1 289 aa31.08■■■□□ 2.57
CMTM4-202ENST00000394106 FAM71BQ8TC56 605 aa31.08■■■□□ 2.57
CMTM4-202ENST00000394106 ERVMER34-1Q9H9K5 563 aa31.08■■■□□ 2.57
CMTM4-202ENST00000394106 SEPT3Q9UH03 358 aa31.08■■■□□ 2.57
CMTM4-202ENST00000394106 CABIN1Q9Y6J0 2220 aa31.08■■■□□ 2.57
CMTM4-202ENST00000394106 AREL1O15033 823 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 RAD51BO15315 384 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 ITGAVP06756 1048 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 KRT7P08729 469 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 CSNK1DP48730 415 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 ZNF75DP51815 510 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 SLC10A7Q0GE19 358 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 INAVAQ3KP66 663 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 ZSCAN30Q86W11 494 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 OXR1Q8N573 874 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 OR13H1Q8NG92 308 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 ZNF641Q96N77 438 aaPredicted RBP31.07■■■□□ 2.56
CMTM4-202ENST00000394106 ZNF599Q96NL3 588 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 TUBGCP5Q96RT8 1024 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 C1QTNF2Q9BXJ5 285 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 ATP13A3Q9H7F0 1226 aa31.07■■■□□ 2.56
CMTM4-202ENST00000394106 MUSKO15146 869 aa31.06■■■□□ 2.56
CMTM4-202ENST00000394106 YKT6O15498 198 aa31.06■■■□□ 2.56
CMTM4-202ENST00000394106 TOP3BO95985 862 aaKnown RBP31.06■■■□□ 2.56
CMTM4-202ENST00000394106 RENBPP51606 427 aa31.06■■■□□ 2.56
CMTM4-202ENST00000394106 ZNF235Q14590 738 aa31.06■■■□□ 2.56
CMTM4-202ENST00000394106 PDK2Q15119 407 aa31.06■■■□□ 2.56
CMTM4-202ENST00000394106 PTAR1Q7Z6K3 402 aaPredicted RBP31.06■■■□□ 2.56
CMTM4-202ENST00000394106 RHOT2Q8IXI1 618 aa31.06■■■□□ 2.56
CMTM4-202ENST00000394106 PAF1Q8N7H5 531 aa31.06■■■□□ 2.56
CMTM4-202ENST00000394106 BAHD1Q8TBE0 780 aaPredicted RBP31.06■■■□□ 2.56
CMTM4-202ENST00000394106 CXorf40AQ8TE69 158 aa31.06■■■□□ 2.56
CMTM4-202ENST00000394106 CDC6Q99741 560 aa31.06■■■□□ 2.56
CMTM4-202ENST00000394106 WRAP53Q9BUR4 548 aaKnown RBP31.06■■■□□ 2.56
CMTM4-202ENST00000394106 ANKRD36A6QL64 1941 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 A6NNZ2 444 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 MMP20O60882 483 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 SPINK2P20155 84 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 EPHA8P29322 1005 aaPredicted RBP31.05■■■□□ 2.56
CMTM4-202ENST00000394106 SERPINA4P29622 427 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 SCNN1BP51168 640 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 SHC2P98077 582 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 ANKRD20A8PQ5CZ79 823 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 MAP7D3Q8IWC1 876 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 HCAR2Q8TDS4 363 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 SAP25Q8TEE9 199 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 RFFLQ8WZ73 363 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 PSKH2Q96QS6 385 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 SHROOM3Q8TF72 1996 aa31.05■■■□□ 2.56
CMTM4-202ENST00000394106 TSPAN11A1L157 253 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 MFSD11O43934 449 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 MAFKO60675 156 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 FTH1P19P0C7X4 201 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 NSUN2Q08J23 767 aaKnown RBP eCLIP31.04■■■□□ 2.56
CMTM4-202ENST00000394106 BNIP3Q12983 259 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 Q6ZSR6 202 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 ABI3BPQ7Z7G0 1075 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 GAS2L3Q86XJ1 694 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 PCDH19Q8TAB3 1148 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 NSMCE1Q8WV22 266 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 BMFQ96LC9 184 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 ZNF670Q9BS34 389 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 HS3ST3A1Q9Y663 406 aa31.04■■■□□ 2.56
CMTM4-202ENST00000394106 TTC24A2A3L6 582 aaPredicted RBP31.03■■■□□ 2.56
CMTM4-202ENST00000394106 POM121BA6NF01 834 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 PEX11BO96011 259 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 ARHGAP25P42331 645 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 RXRGP48443 463 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 SUOXP51687 545 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 BCL2L1Q07817 233 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 ELP6Q0PNE2 266 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 UGP2Q16851 508 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 NCBP2-AS2Q69YL0 99 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 BRAT1Q6PJG6 821 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 GLRX5Q86SX6 157 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 ZSWIM9Q86XI8 627 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 PNPLA1Q8N8W4 532 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 MRFAP1L1Q96HT8 127 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 CNTNAP3BQ96NU0 1288 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 CNTNAP3Q9BZ76 1288 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 PCDH12Q9NPG4 1184 aa31.03■■■□□ 2.56
CMTM4-202ENST00000394106 INTUQ9ULD6 942 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms