RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CCDC185Q8N715 623 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 C3orf20Q8ND61 904 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 OR6K2Q8NGY2 324 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 LMX1AQ8TE12 382 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 C11orf70Q9BRQ4 267 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 CAAP1Q9H8G2 361 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 DONSONQ9NYP3 566 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 APOBEC3BQ9UH17 382 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 COL27A1Q8IZC6 1860 aaPredicted RBP17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 SIGLEC16A6NMB1 481 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 BUB1O43683 1085 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 TMCC1O94876 653 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 IGSF6O95976 241 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 CALB1P05937 261 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 MYF5P13349 255 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 TGM2P21980 687 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 RFC1P35251 1148 aaPredicted RBP17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 STAT1P42224 750 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 NSFP46459 744 aaKnown RBP17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 BLKP51451 505 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 SKOR1P84550 965 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 RHDQ02161 417 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 GRM3Q14832 879 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 CDKN3Q16667 212 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 PARP15Q460N3 678 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 C6orf132Q5T0Z8 1188 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 GUSBP11Q6P575 273 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 LVRNQ6Q4G3 990 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 MACC1Q6ZN28 852 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 EFL1Q7Z2Z2 1120 aaKnown RBP17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 SLC30A5Q8TAD4 765 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 SLC46A1Q96NT5 459 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 NOL6Q9H6R4 1146 aaKnown RBP17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 FAM207AQ9NSI2 230 aaPredicted RBP17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 TAB2Q9NYJ8 693 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 ADAM22Q9P0K1 906 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 GGT7Q9UJ14 662 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 ITM2BQ9Y287 266 aa17.71■□□□□ 0.43
SNRPA1-202ENST00000394082 TMEM110-MUSTN1A8MSY1 372 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 GPD1P21695 349 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 EPHB2P29323 1055 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 HTR7P34969 479 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 IGFALSP35858 605 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 CXADRP78310 365 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 ELP6Q0PNE2 266 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 AGERQ15109 404 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 KRT31Q15323 416 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 DEFB133Q30KQ1 61 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 TMEM52BQ4KMG9 183 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 EFHC2Q5JST6 749 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 FKBP15Q5T1M5 1219 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 WDR59Q6PJI9 974 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 RBM44Q6ZP01 1051 aaKnown RBP17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 PHACTR4Q8IZ21 702 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 UMODL1-AS1Q8N2C9 162 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 TP53I13Q8NBR0 393 aaPredicted RBP17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 CXorf40AQ8TE69 158 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 CCDC97Q96F63 343 aaPredicted RBP17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 SELENOOQ9BVL4 669 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 SLC13A1Q9BZW2 595 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 VPS16Q9H269 839 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 CATSPERBQ9H7T0 1116 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 SIK3Q9Y2K2 1263 aa17.7■□□□□ 0.42
SNRPA1-202ENST00000394082 TCRBV5S1A1TA0A578 114 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 FAM170AA1A519 330 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 TSPAN11A1L157 253 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 CPED1A4D0V7 1026 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 GCATO75600 419 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 TIMP2P16035 220 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 ZNF143P52747 638 aaPredicted RBP17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 C1QBPQ07021 282 aaKnown RBP17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 SERINC3Q13530 473 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 CLEC16AQ2KHT3 1053 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 PRRT3Q5FWE3 981 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 ATXN7L2Q5T6C5 722 aaPredicted RBP17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 SLC35F3Q8IY50 421 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 FSTL5Q8N475 847 aaPredicted RBP17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 KCNE4Q8WWG9 221 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 PCDHB18PQ96TA0 734 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 EPAS1Q99814 870 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 LRRC61Q9BV99 259 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 MAGEB5Q9BZ81 275 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 SATB2Q9UPW6 733 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 ENTPD2Q9Y5L3 495 aa17.69■□□□□ 0.42
SNRPA1-202ENST00000394082 CDRT15L2A8MXV6 281 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 EPHB6O15197 1021 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 YY2O15391 372 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 FGF10O15520 208 aaPredicted RBP17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 MMP20O60882 483 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 PRB1P04280 392 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 ANXA6P08133 673 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 RBMS1P29558 406 aaKnown RBP17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 EIF4A3P38919 411 aaKnown RBP17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 KLK7P49862 253 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 RHOAP61586 193 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 PPARDQ03181 441 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 ESRP1Q6NXG1 681 aaKnown RBP17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 PCSK4Q6UW60 755 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 CLEC17AQ6ZS10 378 aa17.68■□□□□ 0.42
SNRPA1-202ENST00000394082 MON1BQ7L1V2 547 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms