RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 LOC285095A0A1B0GVY8 99 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 EIF3HO15372 352 aaKnown RBP eCLIP24.52■■□□□ 1.52
LRFN4-202ENST00000393952 PIGNO95427 931 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 HLA-EP13747 358 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 TNFRSF4P43489 277 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 MAPK8P45983 427 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 DNAJC21Q5F1R6 531 aaKnown RBP24.52■■□□□ 1.52
LRFN4-202ENST00000393952 FSTL4Q6MZW2 842 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 CEP128Q6ZU80 1094 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 ANKMY2Q8IV38 441 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 VOPP1Q96AW1 172 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 ACOX2Q99424 681 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 PHACTR1Q9C0D0 580 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 DUSP12Q9UNI6 340 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 CHKBQ9Y259 395 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 STARD13Q9Y3M8 1113 aa24.52■■□□□ 1.52
LRFN4-202ENST00000393952 EGFP01133 1207 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 GLULP15104 373 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 TPH1P17752 444 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 MGAT1P26572 445 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 MAGEA4P43358 317 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 RECQLP46063 649 aaPredicted RBP24.51■■□□□ 1.51
LRFN4-202ENST00000393952 SEC13P55735 322 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 CDH17Q12864 832 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 CBLBQ13191 982 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 SLC44A4Q53GD3 710 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 TMEM196Q5HYL7 178 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 SERPINA13PQ6UXR4 307 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 CAMK1DQ8IU85 385 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 PLPP6Q8IY26 295 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 ZBED8Q8IZ13 594 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 MPP5Q8N3R9 675 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 PTPRN2Q92932 1015 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 C9orf72Q96LT7 481 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 TRIB3Q96RU7 358 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 TMEM245Q9H330 911 aa24.51■■□□□ 1.51
LRFN4-202ENST00000393952 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.5■■□□□ 1.51
LRFN4-202ENST00000393952 SHISA7A6NL88 538 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 WASH3PC4AMC7 463 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 ALOX15BO15296 676 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 POP4O95707 220 aaKnown RBP24.5■■□□□ 1.51
LRFN4-202ENST00000393952 PRLP01236 227 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 ATXN1LP0C7T5 689 aaKnown RBP24.5■■□□□ 1.51
LRFN4-202ENST00000393952 PRKCHP24723 683 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 IL12RB1P42701 662 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 PMS2P54278 862 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 CRADDP78560 199 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 GALNT3Q14435 633 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 SLC1A5Q15758 541 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 SIRPB2Q5JXA9 342 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 UBAP2Q5T6F2 1119 aaKnown RBP24.5■■□□□ 1.51
LRFN4-202ENST00000393952 TPRG1Q6ZUI0 275 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 SIGLEC10Q96LC7 697 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 CDC42EP4Q9H3Q1 356 aaKnown RBP24.5■■□□□ 1.51
LRFN4-202ENST00000393952 SEMA4AQ9H3S1 761 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 ZDHHC6Q9H6R6 413 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 ATP13A3Q9H7F0 1226 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 MYLKQ15746 1914 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 ATG2BQ96BY7 2078 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 COL6A3P12111 3177 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 NDST3O95803 873 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 EPOP01588 193 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 PDHA1P08559 390 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 BMP1P13497 986 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 HNRNPLP14866 589 aaKnown RBP eCLIP24.5■■□□□ 1.51
LRFN4-202ENST00000393952 ELK3P41970 407 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 KIR2DL1P43626 348 aaPredicted RBP24.5■■□□□ 1.51
LRFN4-202ENST00000393952 BCL2L1Q07817 233 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 HNRNPA1L2Q32P51 320 aaKnown RBP24.5■■□□□ 1.51
LRFN4-202ENST00000393952 CERCAMQ5T4B2 595 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 RELL1Q8IUW5 271 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 IGDCC3Q8IVU1 814 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 PDCD6IPQ8WUM4 868 aaKnown RBP24.5■■□□□ 1.51
LRFN4-202ENST00000393952 ARNT2Q9HBZ2 717 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 SYBUQ9NX95 663 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 CACNA2D2Q9NY47 1150 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 CHMP2BQ9UQN3 213 aa24.5■■□□□ 1.51
LRFN4-202ENST00000393952 EDDM13A0A1B0GTR0 161 aa24.49■■□□□ 1.51
LRFN4-202ENST00000393952 C19orf67A6NJJ6 358 aa24.49■■□□□ 1.51
LRFN4-202ENST00000393952 SDR42E2A6NKP2 422 aa24.49■■□□□ 1.51
LRFN4-202ENST00000393952 CHRM1P11229 460 aaPredicted RBP24.49■■□□□ 1.51
LRFN4-202ENST00000393952 RAD51Q06609 339 aa24.49■■□□□ 1.51
LRFN4-202ENST00000393952 GRSF1Q12849 480 aaKnown RBP eCLIP24.49■■□□□ 1.51
LRFN4-202ENST00000393952 DENND2CQ68D51 928 aa24.49■■□□□ 1.51
LRFN4-202ENST00000393952 MREGQ8N565 214 aa24.49■■□□□ 1.51
LRFN4-202ENST00000393952 ZNF513Q8N8E2 541 aaPredicted RBP24.49■■□□□ 1.51
LRFN4-202ENST00000393952 FBXO36Q8NEA4 188 aa24.49■■□□□ 1.51
LRFN4-202ENST00000393952 LPCAT1Q8NF37 534 aa24.49■■□□□ 1.51
LRFN4-202ENST00000393952 MSANTD3Q96H12 275 aa24.49■■□□□ 1.51
LRFN4-202ENST00000393952 CPEB1Q9BZB8 566 aaKnown RBP24.49■■□□□ 1.51
LRFN4-202ENST00000393952 NINJ2Q9NZG7 142 aa24.49■■□□□ 1.51
LRFN4-202ENST00000393952 BFARQ9NZS9 450 aa24.49■■□□□ 1.51
LRFN4-202ENST00000393952 ARIH1Q9Y4X5 557 aaPredicted RBP24.49■■□□□ 1.51
LRFN4-202ENST00000393952 TEX264Q9Y6I9 313 aa24.49■■□□□ 1.51
LRFN4-202ENST00000393952 AP3B1O00203 1094 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 HLA-DPA1P20036 260 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 DRD1P21728 446 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 CA4P22748 312 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 SERPINA4P29622 427 aa24.48■■□□□ 1.51
LRFN4-202ENST00000393952 TIE1P35590 1138 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms