RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 A0A1B0GTW7 788 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 PRR5-ARHGAP8B1AHC4 643 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 RNGTTO60942 597 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 PCDH8O95206 1070 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 PIGNO95427 931 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 CCNB1P14635 433 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 SERPINA4P29622 427 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 PPIDQ08752 370 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 ITKQ08881 620 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 AP1B1Q10567 949 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 TRIM61Q5EBN2 209 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 RALGPS1Q5JS13 557 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 CFAP58Q5T655 872 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 SLC23A3Q6PIS1 610 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 CAMK1DQ8IU85 385 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 PGBD5Q8N414 524 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 LRRN4Q8WUT4 740 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 P3H4Q92791 437 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 NUDCD1Q96RS6 583 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 LGMNQ99538 433 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 MGME1Q9BQP7 344 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 HEMGNQ9BXL5 484 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 RBM22Q9NW64 420 aaKnown RBP eCLIP19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 AMACRQ9UHK6 382 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 SLC6A14Q9UN76 642 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 EFR3BQ9Y2G0 817 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 PPP2R2CQ9Y2T4 447 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 FADS3Q9Y5Q0 445 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 ZNF292O60281 2723 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 A0A1W2PPC4 97 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 PATE3B3GLJ2 98 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 BCAT2O15382 392 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 AP1G1O43747 822 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 CFIP05156 583 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 SERPINF2P08697 491 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 TIMP2P16035 220 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 XPAP23025 273 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 NUDT1P36639 197 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 SUOXP51687 545 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 AASDHQ4L235 1098 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 CCDC181Q5TID7 509 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 TRIM69Q86WT6 500 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 ZCCHC9Q8N567 271 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 PAF1Q8N7H5 531 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 ALG3Q92685 438 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 FEM1CQ96JP0 617 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 PDLIM2Q96JY6 352 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 OLFM3Q96PB7 478 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 OSBPL8Q9BZF1 889 aa19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 PACSIN2Q9UNF0 486 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-204ENST00000393546 A0A1W2PQU0 124 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 TTC24A2A3L6 582 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 C10orf142B7Z368 130 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 NEMP1O14524 444 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 TSPAN6O43657 245 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 JCHAINP01591 159 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 PYGMP11217 842 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 CR2P20023 1033 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 CES1P23141 567 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 MAT2AP31153 395 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 PTPN7P35236 360 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 MAXP61244 160 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 PPP2CBP62714 309 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 PPP2CAP67775 309 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 IRX4P78413 519 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 LMNB2Q03252 620 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 ADCY2Q08462 1091 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 TCEAL6Q6IPX3 200 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 BRAT1Q6PJG6 821 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 BBS12Q6ZW61 710 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 HORMAD1Q86X24 394 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 C1orf216Q8TAB5 229 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 TCEAL3Q969E4 200 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 HES6Q96HZ4 224 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 ALS2CR12Q96Q35 445 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 POLR1EQ9GZS1 481 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 NOD2Q9HC29 1040 aa19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 SAE1Q9UBE0 346 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-204ENST00000393546 TSPAN11A1L157 253 aa19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 KCNK1O00180 336 aa19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 DDX3YO15523 660 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 LATO43561 262 aa19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 GJB3O75712 270 aa19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 ABL2P42684 1182 aa19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 POLR2LP62875 67 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 IFI35P80217 286 aaPredicted RBP19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 ARHGAP8P85298 464 aa19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 SETMARQ53H47 684 aaPredicted RBP19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 ZSCAN30Q86W11 494 aa19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 TFB1MQ8WVM0 346 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 SEMA3CQ99985 751 aa19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 EBF2Q9HAK2 575 aa19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 TM9SF3Q9HD45 589 aa19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 DMTF1Q9Y222 760 aa19.18■□□□□ 0.66
PDLIM7-204ENST00000393546 A0A1W2PQ67 120 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 APOC4-APOC2K7ER74 178 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 SOCS5O75159 536 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 TJP3O95049 919 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms