RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 MAZP56270 477 aaKnown RBP16.27■□□□□ 0.19
SHANK1-204ENST00000391814 OR2B6P58173 313 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 SLC34A3Q8N130 599 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 CXorf21Q9HAI6 301 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 PIM2Q9P1W9 311 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 SLC25A13Q9UJS0 675 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.27■□□□□ 0.19
SHANK1-204ENST00000391814 CAMSAP1Q5T5Y3 1602 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 TULP4Q9NRJ4 1543 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 ARHGEF33A8MVX0 844 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 FFAR3O14843 346 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 GPR42O15529 346 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 FBXO21O94952 628 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 TRUB2O95900 331 aaKnown RBP16.27■□□□□ 0.19
SHANK1-204ENST00000391814 OMPP47874 163 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 RHOAP61586 193 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 RPL38P63173 70 aaKnown RBP16.27■□□□□ 0.19
SHANK1-204ENST00000391814 RALGPS1Q5JS13 557 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 PSTKQ8IV42 348 aaKnown RBP16.27■□□□□ 0.19
SHANK1-204ENST00000391814 WDR55Q9H6Y2 383 aaPredicted RBP16.27■□□□□ 0.19
SHANK1-204ENST00000391814 TRIM64CA6NLI5 447 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 CLDN25C9JDP6 229 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 RGS10O43665 173 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 DRG2P55039 364 aaKnown RBP16.26■□□□□ 0.19
SHANK1-204ENST00000391814 VWA5B1Q5TIE3 1220 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 MOXD1Q6UVY6 613 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 CXXC5Q7LFL8 322 aaKnown RBP16.26■□□□□ 0.19
SHANK1-204ENST00000391814 CDYL2Q8N8U2 506 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 DIRAS2Q96HU8 199 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 PRAMEF33A0A0G2JMD5 474 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 HDAC3O15379 428 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 PRAMEF10O60809 474 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 ATP5F1P24539 256 aaPredicted RBP16.26■□□□□ 0.19
SHANK1-204ENST00000391814 SDC2P34741 201 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 UGT2B15P54855 530 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 KLF10Q13118 480 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 MAPKAPK3Q16644 382 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 PLET1Q6UQ28 207 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 CYP20A1Q6UW02 462 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 DSG4Q86SJ6 1040 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 TRPV1Q8NER1 839 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 TBC1D16Q8TBP0 767 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 TCRBV9S1A1TA0A576 114 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 MYL4P12829 197 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 TSHRP16473 764 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 AZGP1P25311 298 aaKnown RBP16.26■□□□□ 0.19
SHANK1-204ENST00000391814 MARC1Q5VT66 337 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 RSPH9Q9H1X1 276 aaPredicted RBP16.26■□□□□ 0.19
SHANK1-204ENST00000391814 UNC13BO14795 1591 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 KPNA6O60684 536 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 BMP10O95393 424 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 RHOCP08134 193 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 TUFMP49411 452 aaKnown RBP16.26■□□□□ 0.19
SHANK1-204ENST00000391814 RAB10P61026 200 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 RNF38Q9H0F5 515 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 PREBQ9HCU5 417 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 NKX1-2Q9UD57 310 aaPredicted RBP16.26■□□□□ 0.19
SHANK1-204ENST00000391814 ATP6AP2A0A1C7CYW4 349 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 KCNU1A8MYU2 1149 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 TISP43B9A030 160 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 ATP6AP2O75787 350 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 ECDO95905 644 aaPredicted RBP16.26■□□□□ 0.19
SHANK1-204ENST00000391814 SCRN3Q0VDG4 424 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 C15orf59Q2T9L4 293 aaPredicted RBP16.26■□□□□ 0.19
SHANK1-204ENST00000391814 SLC38A2Q96QD8 506 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 TPK1Q9H3S4 243 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 USP20Q9Y2K6 914 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 PPP2R3BQ9Y5P8 575 aa16.26■□□□□ 0.19
SHANK1-204ENST00000391814 A0A0J9YYE9 177 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 TOP3BO95985 862 aaKnown RBP16.25■□□□□ 0.19
SHANK1-204ENST00000391814 BOP1Q14137 746 aaKnown RBP16.25■□□□□ 0.19
SHANK1-204ENST00000391814 FAM220AQ7Z4H9 259 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 PALB2Q86YC2 1186 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 PIK3C3Q8NEB9 887 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 KAT5Q92993 513 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 FBXO32Q969P5 355 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 BBS4Q96RK4 519 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 DSN1Q9H410 356 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 GPN1Q9HCN4 374 aaPredicted RBP16.25■□□□□ 0.19
SHANK1-204ENST00000391814 TRPM5Q9NZQ8 1165 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 MTSS1LQ765P7 747 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 PHF10Q8WUB8 498 aaKnown RBP16.25■□□□□ 0.19
SHANK1-204ENST00000391814 ZNF570Q96NI8 536 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 CNPPD1Q9BV87 410 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 TBC1D24Q9ULP9 559 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 LRIG2O94898 1065 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 TYMPP19971 482 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 FSCN1Q16658 493 aaKnown RBP16.25■□□□□ 0.19
SHANK1-204ENST00000391814 POMGNT2Q8NAT1 580 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 SYTL5Q8TDW5 730 aaPredicted RBP16.25■□□□□ 0.19
SHANK1-204ENST00000391814 HASPINQ8TF76 798 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 BARX2Q9UMQ3 279 aaPredicted RBP16.25■□□□□ 0.19
SHANK1-204ENST00000391814 POLR3HQ9Y535 204 aaPredicted RBP16.25■□□□□ 0.19
SHANK1-204ENST00000391814 LRRC10BA6NIK2 292 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 EPORP19235 508 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 FAM20CQ8IXL6 584 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 RDH11Q8TC12 318 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 MRPL57Q9BQC6 102 aaKnown RBP16.25■□□□□ 0.19
SHANK1-204ENST00000391814 LRRC4CQ9HCJ2 640 aa16.25■□□□□ 0.19
SHANK1-204ENST00000391814 PPIEQ9UNP9 301 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms