RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 FBXO48Q5FWF7 155 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 PKN3Q6P5Z2 889 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 HERC6Q8IVU3 1022 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 CPSF7Q8N684 471 aaKnown RBP21.18■□□□□ 0.98
COL23A1-201ENST00000390654 NPLOC4Q8TAT6 608 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 MRPS26Q9BYN8 205 aaKnown RBP21.18■□□□□ 0.98
COL23A1-201ENST00000390654 MRPL46Q9H2W6 279 aaKnown RBP21.18■□□□□ 0.98
COL23A1-201ENST00000390654 A0A0G2JMZ2 1700 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 LRRC37A2A6NM11 1700 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 TRIP12Q14669 1992 aaPredicted RBP21.18■□□□□ 0.98
COL23A1-201ENST00000390654 MAGEB16A2A368 324 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 FBP2O00757 339 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 AP1G1O43747 822 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 ZNF26P17031 533 aaPredicted RBP21.18■□□□□ 0.98
COL23A1-201ENST00000390654 GALNT2Q10471 571 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 SH3RF2Q8TEC5 729 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 ABTB1Q969K4 478 aaPredicted RBP21.18■□□□□ 0.98
COL23A1-201ENST00000390654 PAAF1Q9BRP4 392 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 FSD1LQ9BXM9 530 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 FAM124BQ9H5Z6 455 aaPredicted RBP21.18■□□□□ 0.98
COL23A1-201ENST00000390654 VTA1Q9NP79 307 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 PTTG2Q9NZH5 202 aa21.18■□□□□ 0.98
COL23A1-201ENST00000390654 CASTOR2A6NHX0 329 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 SAC3D1A6NKF1 404 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 TRIM38O00635 465 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 MSI1O43347 362 aaKnown RBP21.17■□□□□ 0.98
COL23A1-201ENST00000390654 KRT80Q6KB66 452 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 TAC4Q86UU9 113 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 FAM35AQ86V20 835 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 DRAXINQ8NBI3 349 aaPredicted RBP21.17■□□□□ 0.98
COL23A1-201ENST00000390654 SPPL2BQ8TCT7 592 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 SENP8Q96LD8 212 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 BRD8Q9H0E9 1235 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 VTI1BQ9UEU0 232 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 AURKCQ9UQB9 309 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 CROCCQ5TZA2 2017 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 UBDO15205 165 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 MAXP61244 160 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 SNX17Q15036 470 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 REP15Q6BDI9 236 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 OLFM1Q99784 485 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 KIFC1Q9BW19 673 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 TRHDEQ9UKU6 1024 aa21.17■□□□□ 0.98
COL23A1-201ENST00000390654 PSMD12O00232 456 aaPredicted RBP21.16■□□□□ 0.98
COL23A1-201ENST00000390654 CCDC166P0CW27 439 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 TRIM25Q14258 630 aaKnown RBP21.16■□□□□ 0.98
COL23A1-201ENST00000390654 PABPC1LQ4VXU2 614 aaKnown RBP21.16■□□□□ 0.98
COL23A1-201ENST00000390654 GPR142Q7Z601 462 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 SETD3Q86TU7 594 aaPredicted RBP21.16■□□□□ 0.98
COL23A1-201ENST00000390654 AHI1Q8N157 1196 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 TSPAN14Q8NG11 270 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 MPP6Q9NZW5 540 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 EGFL7Q9UHF1 273 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 BCAP29Q9UHQ4 241 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 ANKRD6Q9Y2G4 727 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 SLC4A1P02730 911 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 GALK1P51570 392 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 GEN1Q17RS7 908 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 PCID2Q5JVF3 399 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 BNIPLQ7Z465 357 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 SCAMP5Q8TAC9 235 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 RBM38Q9H0Z9 239 aaKnown RBP21.16■□□□□ 0.98
COL23A1-201ENST00000390654 CACNA2D2Q9NY47 1150 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 LOC285556D6RIA3 1793 aa21.16■□□□□ 0.98
COL23A1-201ENST00000390654 PDLIM1O00151 329 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 PPP6CO00743 305 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 PTGESO14684 152 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 AKAP10O43572 662 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 FOXD2O60548 495 aaPredicted RBP21.15■□□□□ 0.98
COL23A1-201ENST00000390654 TADA2AO75478 443 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 ITKQ08881 620 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 TBC1D25Q3MII6 688 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 DUSP28Q4G0W2 176 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 ATPAF2Q8N5M1 289 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 MAML3Q96JK9 1138 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 FBXO5Q9UKT4 447 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 TTC3P53804 2025 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 LAMA3Q16787 3333 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 PFDN1O60925 122 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 GRIA3P42263 894 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 SCNN1BP51168 640 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 SLC7A2P52569 658 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 YBX1P67809 324 aaKnown RBP21.15■□□□□ 0.98
COL23A1-201ENST00000390654 FAM83EQ2M2I3 478 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 UBXN11Q5T124 520 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 C9orf131Q5VYM1 1079 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 CUZD1Q86UP6 607 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 ANKRD49Q8WVL7 239 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 GAD1Q99259 594 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 NDUFA13Q9P0J0 144 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 OR51F1A6NGY5 319 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 ERI2A8K979 691 aaKnown RBP21.15■□□□□ 0.98
COL23A1-201ENST00000390654 NCAM2O15394 837 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 MAGEB3O15480 346 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 SUPT7LO94864 414 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 CLIC3O95833 236 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 BDNFP23560 247 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 PNPLA4P41247 253 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 CLCNKBP51801 687 aa21.15■□□□□ 0.98
COL23A1-201ENST00000390654 TMED1Q13445 227 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms