RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 TKTP29401 623 aaKnown RBP13.58□□□□□ -0.24
CCDC57-202ENST00000389641 ARL2P36404 184 aa13.58□□□□□ -0.24
CCDC57-202ENST00000389641 IFITM3Q01628 133 aa13.58□□□□□ -0.24
CCDC57-202ENST00000389641 SPCS2Q15005 226 aa13.58□□□□□ -0.24
CCDC57-202ENST00000389641 OXA1LQ15070 435 aa13.58□□□□□ -0.24
CCDC57-202ENST00000389641 RNF19BQ6ZMZ0 732 aa13.58□□□□□ -0.24
CCDC57-202ENST00000389641 LRRC71Q8N4P6 559 aa13.58□□□□□ -0.24
CCDC57-202ENST00000389641 CAPSLQ8WWF8 208 aa13.58□□□□□ -0.24
CCDC57-202ENST00000389641 UHRF1Q96T88 793 aaPredicted RBP13.58□□□□□ -0.24
CCDC57-202ENST00000389641 PDZD7Q9H5P4 517 aa13.58□□□□□ -0.24
CCDC57-202ENST00000389641 PIF1Q9H611 641 aa13.58□□□□□ -0.24
CCDC57-202ENST00000389641 EPS8L2Q9H6S3 715 aa13.58□□□□□ -0.24
CCDC57-202ENST00000389641 KLQ9UEF7 1012 aa13.58□□□□□ -0.24
CCDC57-202ENST00000389641 VTI1BQ9UEU0 232 aa13.58□□□□□ -0.24
CCDC57-202ENST00000389641 OGTO15294 1046 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 SNRPB2P08579 225 aaKnown RBP13.57□□□□□ -0.24
CCDC57-202ENST00000389641 PROZP22891 400 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 GNL1P36915 607 aaPredicted RBP13.57□□□□□ -0.24
CCDC57-202ENST00000389641 MAGEA12P43365 314 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 NDST1P52848 882 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 IFRD2Q12894 506 aaPredicted RBP13.57□□□□□ -0.24
CCDC57-202ENST00000389641 SAMD4BQ5PRF9 694 aaKnown RBP13.57□□□□□ -0.24
CCDC57-202ENST00000389641 STRIP1Q5VSL9 837 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 FAM131BQ86XD5 332 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 DDIASQ8IXT1 998 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 ZNF567Q8N184 647 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 PNPLA1Q8N8W4 532 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 CXorf38Q8TB03 319 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 SPPL2BQ8TCT7 592 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 LTB4R2Q9NPC1 389 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 UTP6Q9NYH9 597 aaKnown RBP13.57□□□□□ -0.24
CCDC57-202ENST00000389641 GIMAP2Q9UG22 337 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 VANGL2Q9ULK5 521 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 TRAF6Q9Y4K3 522 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 SLC30A1Q9Y6M5 507 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 DOCK5Q9H7D0 1870 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 TRIP11Q15643 1979 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 NRP2O60462 931 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 CLASP2O75122 1294 aaKnown RBP13.57□□□□□ -0.24
CCDC57-202ENST00000389641 CILPO75339 1184 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 MLNP12872 115 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 NCK1P16333 377 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 FASP25445 335 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 CLCQ05315 142 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 POU5F1BQ06416 359 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 TIGD2Q4W5G0 525 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 KCNMB4Q86W47 210 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 ZNF354CQ86Y25 554 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 C1orf127Q8N9H9 656 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 RNF149Q8NC42 400 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 PDZD8Q8NEN9 1154 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 HDAC10Q969S8 669 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 BEGAINQ9BUH8 593 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 DEFB129Q9H1M3 183 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 RAD21L1Q9H4I0 556 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 PKD2L2Q9NZM6 624 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 BRWD3Q6RI45 1802 aa13.57□□□□□ -0.24
CCDC57-202ENST00000389641 ZCWPW2A0A1B0GU75 182 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 PFDN6O15212 129 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 SLC22A2O15244 555 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 MSCO60682 206 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 CABYRO75952 493 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 HSPA8P11142 646 aaKnown RBP13.56□□□□□ -0.24
CCDC57-202ENST00000389641 CCND2P30279 289 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 ADSLP30566 484 aaPredicted RBP13.56□□□□□ -0.24
CCDC57-202ENST00000389641 HOXD11P31277 338 aaPredicted RBP13.56□□□□□ -0.24
CCDC57-202ENST00000389641 TTKP33981 857 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 AP3M2P53677 418 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 LSM3P62310 102 aaKnown RBP13.56□□□□□ -0.24
CCDC57-202ENST00000389641 TRAP1Q12931 704 aaKnown RBP13.56□□□□□ -0.24
CCDC57-202ENST00000389641 INAVAQ3KP66 663 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 SPANXN3Q5MJ09 141 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 EEF1DP3Q658K8 133 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 RETREG3Q86VR2 466 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 CLIP4Q8N3C7 705 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 MFSD2AQ8NA29 543 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 USP33Q8TEY7 942 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 SEPT8Q92599 483 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 KHSRPQ92945 711 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC57-202ENST00000389641 SH3YL1Q96HL8 342 aaPredicted RBP13.56□□□□□ -0.24
CCDC57-202ENST00000389641 ZMAT2Q96NC0 199 aaKnown RBP13.56□□□□□ -0.24
CCDC57-202ENST00000389641 MUS81Q96NY9 551 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 SMARCAD1Q9H4L7 1026 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 ZNF302Q9NR11 478 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 CPSF3Q9UKF6 684 aaKnown RBP13.56□□□□□ -0.24
CCDC57-202ENST00000389641 UBR3Q6ZT12 1888 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 INPP4BO15327 924 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 IL10P22301 178 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 ALDH4A1P30038 563 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 GOLGA7BQ2TAP0 167 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 CYBRD1Q53TN4 286 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 CLEC6AQ6EIG7 209 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 C4orf22Q6V702 233 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 VASH1Q7L8A9 365 aaPredicted RBP13.56□□□□□ -0.24
CCDC57-202ENST00000389641 OR13F1Q8NGS4 319 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 CLIP3Q96DZ5 547 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 PPP1R16BQ96T49 567 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 SEPHS2Q99611 448 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 OSBPL2Q9H1P3 480 aa13.56□□□□□ -0.24
CCDC57-202ENST00000389641 PRDM12Q9H4Q4 367 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms