RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 C9orf16Q9BUW7 83 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 SEZ6LQ9BYH1 1024 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 LHPPQ9H008 270 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 ACAD9Q9H845 621 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 AGPAT4Q9NRZ5 378 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 CISHQ9NSE2 258 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 THG1LQ9NWX6 298 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 GDAP2Q9NXN4 497 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 RABL2AQ9UBK7 228 aaPredicted RBP14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 SLCO1B7G3V0H7 640 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 ACOX3O15254 700 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 PHGDHO43175 533 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 STBD1O95210 358 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 ATP6V1B2P21281 511 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 GARSP41250 739 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 GRIA4P48058 902 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 IRF9Q00978 393 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 STX5Q13190 355 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 AQP6Q13520 282 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 RAB6CQ53S08 254 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 CYBRD1Q53TN4 286 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 ATAD3BQ5T9A4 648 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 SPRED1Q7Z699 444 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 ZNF486Q96H40 463 aaPredicted RBP14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 RAB6CQ9H0N0 254 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 UPF3AQ9H1J1 476 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 NMRAL1Q9HBL8 299 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 MOV10Q9HCE1 1003 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 MAP3K20Q9NYL2 800 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 TMEM181Q9P2C4 612 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 CSADQ9Y600 493 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 DGKBQ9Y6T7 804 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 RASAL1O95294 804 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 CST3P01034 146 aaPredicted RBP14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 CHRNB1P11230 501 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 TGM2P21980 687 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 PRKAA2P54646 552 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 SEZ6Q53EL9 994 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 SAMD4BQ5PRF9 694 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 TBCELQ5QJ74 424 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 ZBTB41Q5SVQ8 909 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 FAAH2Q6GMR7 532 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 USP51Q70EK9 711 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 ANKK1Q8NFD2 765 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 HMGCLL1Q8TB92 370 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 ARNTL2Q8WYA1 636 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 GPRASP2Q96D09 838 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 CPXM1Q96SM3 734 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 CGRRF1Q99675 332 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 HAPLN2Q9GZV7 340 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 TXNDC16Q9P2K2 825 aa14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 GMPR2Q9P2T1 348 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-201ENST00000389386 A0A1W2PQ67 120 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 APOL1O14791 398 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 NUAK1O60285 661 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 SYNCRIPO60506 623 aaKnown RBP14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 BCAS1O75363 584 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 ASS1P00966 412 aaKnown RBP14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 ERVK-10P10266 1014 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 NR4A2P43354 598 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 NKX2-5P52952 324 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 SEMA5AQ13591 1074 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 GRTP1Q5TC63 336 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 REP15Q6BDI9 236 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 GALNT13Q8IUC8 556 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 POLR3FQ9H1D9 316 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 ASNSD1Q9NWL6 643 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 HACD3Q9P035 362 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 ADAM28Q9UKQ2 775 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 OAZ3Q9UMX2 235 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 A0A096LPK6 155 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 B4GAT1O43505 415 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 HSPA8P11142 646 aaKnown RBP14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 NCAM1P13591 858 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 HDCP19113 662 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 PLCL1Q15111 1095 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 LSMEM2Q8N112 164 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 SHCBP1Q8NEM2 672 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 PCDH19Q8TAB3 1148 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 ZFP90Q8TF47 636 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 FKBP10Q96AY3 582 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 NRBF2Q96F24 287 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 CENPNQ96H22 339 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 ZBTB45Q96K62 511 aaPredicted RBP14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 BEGAINQ9BUH8 593 aa14.78□□□□□ -0.04
VPS9D1-201ENST00000389386 ILVBLA1L0T0 632 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 PSAPP07602 524 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 ENO2P09104 434 aaPredicted RBP14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 PGAM1P18669 254 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 ARCN1P48444 511 aaKnown RBP14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 PLA2G16P53816 162 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 DLG2Q15700 870 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 TTC23LQ6PF05 361 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 CLIP4Q8N3C7 705 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 SFRP1Q8N474 314 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 S100ZQ8WXG8 99 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 NACC2Q96BF6 587 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 VMP1Q96GC9 406 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 TXNDC15Q96J42 360 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms