RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 PRO0461Q9UI25 63 aa0.56□□□□□ -2.32
SNORD28-201ENST00000384706 SLCO3A1Q9UIG8 710 aa0.56□□□□□ -2.32
SNORD28-201ENST00000384706 HERC5Q9UII4 1024 aaKnown RBP0.56□□□□□ -2.32
SNORD28-201ENST00000384706 RALYQ9UKM9 306 aaKnown RBP0.56□□□□□ -2.32
SNORD28-201ENST00000384706 CA14Q9ULX7 337 aa0.56□□□□□ -2.32
SNORD28-201ENST00000384706 NFU1Q9UMS0 254 aa0.56□□□□□ -2.32
SNORD28-201ENST00000384706 DHDHQ9UQ10 334 aa0.56□□□□□ -2.32
SNORD28-201ENST00000384706 OSGIN2Q9Y236 505 aa0.56□□□□□ -2.32
SNORD28-201ENST00000384706 CEP83Q9Y592 693 aa0.56□□□□□ -2.32
SNORD28-201ENST00000384706 PSAT1Q9Y617 370 aa0.56□□□□□ -2.32
SNORD28-201ENST00000384706 PDS5AQ29RF7 1337 aaKnown RBP0.56□□□□□ -2.32
SNORD28-201ENST00000384706 ATXN2Q99700 1313 aaKnown RBP0.56□□□□□ -2.32
SNORD28-201ENST00000384706 ADAMTS9Q9P2N4 1935 aa0.56□□□□□ -2.32
SNORD28-201ENST00000384706 AGRNO00468 2067 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 A0A1W2PPC4 97 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 NDUFAF8A1L188 74 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 NPIPB13A6NJU9 1138 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SLC38A8A6NNN8 435 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 NPIPB5A8MRT5 1133 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 VSTM5A8MXK1 200 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SMIM1B2RUZ4 78 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 NPIPB4C9JG80 1138 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 E9PQ18 207 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 BLOC1S5-TXNDC5H3BN57 136 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 H7C423 109 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SH2B2O14492 632 aaPredicted RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SOCS6O14544 535 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 PCDH17O14917 1159 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 PIP5K1BO14986 540 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ARHGEF9O43307 516 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CCNT1O60563 726 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ATP2C2O75185 946 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 NDUFS7O75251 213 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 RGS11O94810 467 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 HEXIM1O94992 359 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 LARGE1O95461 756 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 GLP2RO95838 553 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SCGB1D2O95969 90 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 IGLV1-44P01699 117 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 TFRCP02786 760 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CD48P09326 243 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 PDGFRBP09619 1106 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CYP4B1P13584 511 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 HLA-DOBP13765 273 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 DPEP1P16444 411 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CD53P19397 219 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 RXRAP19793 462 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 YWHAQP27348 245 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 STX2P32856 288 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 GNL1P36915 607 aaPredicted RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 TMPOP42166 694 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 PTPN9P43378 593 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 PRIM2P49643 509 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 RPS6KA3P51812 740 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CASP5P51878 434 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ANAPC15P60006 121 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 GNB1P62873 340 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 PITX1P78337 314 aaPredicted RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 MRPS5P82675 430 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ECT2LQ008S8 904 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 FAM27E3Q08E93 113 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 OASLQ15646 514 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 RAB30Q15771 203 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 PTPROQ16827 1216 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 UGP2Q16851 508 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 BTBD16Q32M84 506 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 AMZ1Q400G9 498 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ZFP69Q49AA0 526 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 GXYLT1Q4G148 440 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ATP13A5Q4VNC0 1218 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 LRRC24Q50LG9 513 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 GPATCH4Q5T3I0 446 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 FAM102BQ5T8I3 360 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SFMBT2Q5VUG0 894 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 TBC1D9BQ66K14 1250 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CES5AQ6NT32 575 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 HIBCHQ6NVY1 386 aaPredicted RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 AADACL2Q6P093 401 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 FAM122CQ6P4D5 195 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SLC27A1Q6PCB7 646 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ATF7IPQ6VMQ6 1270 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF852Q6ZMS4 543 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SYNE3Q6ZMZ3 975 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 KRBA2Q6ZNG9 492 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 C15orf39Q6ZRI6 1047 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CCDC129Q6ZRS4 1044 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 KCTD8Q6ZWB6 473 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 MON1AQ86VX9 555 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 LURAP1LQ8IV03 231 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 HERC6Q8IVU3 1022 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 BRSK2Q8IWQ3 736 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SCN4BQ8IWT1 228 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 RAVER1Q8IY67 606 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 MAGEB6Q8N7X4 407 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 STPG4Q8N801 248 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SCAIQ8N9R8 606 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 OR4N2Q8NGD1 307 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 OTUD7AQ8TE49 926 aaPredicted RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SLC20A1Q8WUM9 679 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms