RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 EPAS1Q99814 870 aa19.18■□□□□ 0.66
TMEM88B-201ENST00000378821 ANP32EQ9BTT0 268 aa19.18■□□□□ 0.66
TMEM88B-201ENST00000378821 KLC2Q9H0B6 622 aa19.18■□□□□ 0.66
TMEM88B-201ENST00000378821 CATSPERBQ9H7T0 1116 aa19.18■□□□□ 0.66
TMEM88B-201ENST00000378821 AP4E1Q9UPM8 1137 aa19.18■□□□□ 0.66
TMEM88B-201ENST00000378821 A6NNZ2 444 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 EIF3CLB5ME19 914 aaKnown RBP19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 TRIM38O00635 465 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 RAD51BO15315 384 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 FGF10O15520 208 aaPredicted RBP19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 TMCC1O94876 653 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 PAK4O96013 591 aaPredicted RBP19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 H2AFZP0C0S5 128 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 TCF4P15884 667 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 CA9Q16790 459 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 Q6ZSR6 202 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 H2AFVQ71UI9 128 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 OR4C6Q8NH72 309 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 MDM1Q8TC05 714 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 CTNNBL1Q8WYA6 563 aaPredicted RBP19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 HMCESQ96FZ2 354 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 EIF3CQ99613 913 aaKnown RBP19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 MYOCQ99972 504 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 CPEB1Q9BZB8 566 aaKnown RBP19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 LRRC19Q9H756 370 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 DKK3Q9UBP4 350 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 GPSM3Q9Y4H4 160 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 ITPR1Q14643 2758 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 GOLGA4Q13439 2230 aaKnown RBP19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 NBEAQ8NFP9 2946 aa19.17■□□□□ 0.66
TMEM88B-201ENST00000378821 FAM208BQ5VWN6 2430 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 KNTC1P50748 2209 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 MYLKQ15746 1914 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 SHROOM3Q8TF72 1996 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 SPTY2D1-AS1A0A0U1RR47 76 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 FAM149AA5PLN7 773 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 POM121BA6NF01 834 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 RASA4BC9J798 803 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 KRIT1O00522 736 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 RASA4O43374 803 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 BUB1O43683 1085 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 SIGLEC6O43699 453 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 CREB3O43889 395 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 PRPSAP2O60256 369 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 PIAS2O75928 621 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 TMEM253P0C7T8 217 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 PCK1P35558 622 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 PIGHQ14442 188 aaPredicted RBP19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 ACAP1Q15027 740 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 ERMARDQ5T6L9 678 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 NIPA2Q8N8Q9 360 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 DENND6BQ8NEG7 585 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 OR6K2Q8NGY2 324 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 HCAR2Q8TDS4 363 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 GDAP1L1Q96MZ0 367 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 KCTD15Q96SI1 283 aaPredicted RBP19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 DHX35Q9H5Z1 703 aaKnown RBP19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 PDFQ9HBH1 243 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 UCKL1Q9NWZ5 548 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 DONSONQ9NYP3 566 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 CTTNBP2NLQ9P2B4 639 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 UVRAGQ9P2Y5 699 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 IP6K2Q9UHH9 426 aa19.16■□□□□ 0.66
TMEM88B-201ENST00000378821 TDRD6O60522 2096 aaKnown RBP19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 IGLON5A6NGN9 336 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 SDC3O75056 442 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 UGT2B4P06133 528 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 IL1R2P27930 398 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 NDST2P52849 883 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 PFN3P60673 137 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 FZD2Q14332 565 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 ATXN7L2Q5T6C5 722 aaPredicted RBP19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 GDPD4Q6W3E5 623 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 LEKR1Q6ZMV7 388 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 CPNE8Q86YQ8 564 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 CENPTQ96BT3 561 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 KLHL32Q96NJ5 620 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 NCAPGQ9BPX3 1015 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 CALN1Q9BXU9 219 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 LHX3Q9UBR4 397 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 ADAMTS20P59510 1910 aa19.15■□□□□ 0.66
TMEM88B-201ENST00000378821 MYO1FO00160 1098 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 IGSF6O95976 241 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 CDC25BP30305 580 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 RABIFP47224 123 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 SUOXP51687 545 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 TPI1P60174 286 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 RAD51Q06609 339 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 SGCGQ13326 291 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 CYTH1Q15438 398 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 SMTNL2Q2TAL5 461 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 CCDC157Q569K6 752 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 AFMIDQ63HM1 303 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 PSTKQ8IV42 348 aaKnown RBP19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 RYBPQ8N488 228 aaPredicted RBP19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 FAM181AQ8N9Y4 354 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 PANX2Q96RD6 677 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 NLGN3Q9NZ94 848 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 GGT7Q9UJ14 662 aa19.14■□□□□ 0.65
TMEM88B-201ENST00000378821 TSPAN11A1L157 253 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms