RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 HAUS2Q9NVX0 235 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 MYOFQ9NZM1 2061 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 E2F8A0AVK6 867 aa17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 MROH6A6NGR9 719 aa17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 TOP3BO95985 862 aaKnown RBP17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 HLA-DPA1P20036 260 aa17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 PBX2P40425 430 aa17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 MAGEA10P43363 369 aaPredicted RBP17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 GALNT3Q14435 633 aa17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 TSTD2Q5T7W7 516 aa17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 KIAA0930Q6ICG6 404 aaPredicted RBP17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 FSTL4Q6MZW2 842 aa17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 RGS9BPQ6ZS82 235 aa17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 GRASPQ7Z6J2 395 aaPredicted RBP17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 PIGWQ7Z7B1 504 aa17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 DCAF4L2Q8NA75 395 aa17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 ATXN7L3BQ96GX2 97 aa17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 PLLPQ9Y342 182 aa17.52■□□□□ 0.39
THUMPD2-201ENST00000378727 XYLBO75191 536 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 PRAMEF12O95522 483 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 PRKCGP05129 697 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 FGF1P05230 155 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 ALADP13716 330 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 GABRB3P28472 473 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 SPRP35270 261 aaPredicted RBP17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 CSE1LP55060 971 aaKnown RBP17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 PDE1BQ01064 536 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 PDE1CQ14123 709 aaPredicted RBP17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 ZKSCAN8Q15776 578 aaPredicted RBP17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 SEPT7Q16181 437 aaKnown RBP17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 ARHGAP15Q53QZ3 475 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 PDE12Q6L8Q7 609 aaKnown RBP17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 DCLK2Q8N568 766 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 OR13J1Q8NGT2 312 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 ACMSDQ8TDX5 336 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 ISL2Q96A47 359 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 SEC16BQ96JE7 1060 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 SAMD11Q96NU1 681 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 CERS4Q9HA82 394 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 SCUBE2Q9NQ36 999 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 LHX3Q9UBR4 397 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 GGT7Q9UJ14 662 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 MTO1Q9Y2Z2 717 aaKnown RBP17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 CDH23Q9H251 3354 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 LDB2O43679 373 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 SIN3BO75182 1162 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 NDST3O95803 873 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 MT-CO1P00395 513 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 CRHR1P34998 444 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 MAGEA12P43365 314 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 LMAN2Q12907 356 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 INO80DQ53TQ3 878 aaPredicted RBP17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 GKAP1Q5VSY0 366 aaPredicted RBP17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 FYB2Q5VWT5 728 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 DENND6AQ8IWF6 608 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 LEMD2Q8NC56 503 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 ACVR1CQ8NER5 493 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 FIBINQ8TAL6 211 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 ZSWIM3Q96MP5 696 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 NUDCD1Q96RS6 583 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 TDP1Q9NUW8 608 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 ZDHHC7Q9NXF8 308 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 CHKBQ9Y259 395 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 KCTD3Q9Y597 815 aa17.51■□□□□ 0.39
THUMPD2-201ENST00000378727 CCDC195A0A1B0GUA6 201 aa17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 WDR91A4D1P6 747 aa17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 EBAG9O00559 213 aa17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 PAPSS2O95340 614 aaPredicted RBP17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 PRLP01236 227 aa17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 CTBP1Q13363 440 aa17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 ZC3HC1Q86WB0 502 aaKnown RBP17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 VPS39Q96JC1 886 aa17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 ELAC2Q9BQ52 826 aaKnown RBP17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 IQCGQ9H095 443 aaKnown RBP17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 VPS11Q9H270 941 aa17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 NSMCE4AQ9NXX6 385 aa17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 FCF1Q9Y324 198 aaKnown RBP17.5■□□□□ 0.39
THUMPD2-201ENST00000378727 K7ERQ8 282 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 AHSGP02765 367 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 PAMP19021 973 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 CES1P23141 567 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 CD70P32970 193 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 SF3A3Q12874 501 aaKnown RBP eCLIP17.49■□□□□ 0.394e-6■■■■□ 22.2
THUMPD2-201ENST00000378727 PPM1JQ5JR12 505 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 CMC1Q7Z7K0 106 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 ZNF75CPQ92670 426 aaPredicted RBP17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 LMLNQ96KR4 655 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 TDRD1Q9BXT4 1180 aaKnown RBP17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 NSRP1Q9H0G5 558 aaKnown RBP17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 SNX15Q9NRS6 342 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 SOBPA7XYQ1 873 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 PIRTP0C851 137 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 CEBPBP17676 345 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 GMPRP36959 345 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 SLC1A2P43004 574 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 ARSDP51689 593 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 MPP1Q00013 466 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 CGB2Q6NT52 195 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 TMEM25Q86YD3 366 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 CNPY4Q8N129 248 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms