RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ECT2LQ008S8 904 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 WASHC5Q12768 1159 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 CYP1B1Q16678 543 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PPP1R15BQ5SWA1 713 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PIK3R6Q5UE93 754 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 CYB5D1Q6P9G0 228 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 CNTD1Q8N815 330 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 ICA1LQ8NDH6 482 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 CKAP2Q8WWK9 683 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 FEM1CQ96JP0 617 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 CDK15Q96Q40 435 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 WRAP53Q9BUR4 548 aaKnown RBP8.18□□□□□ -1.1
CKAP2-203ENST00000378037 NMRAL1Q9HBL8 299 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 GLOD4Q9HC38 313 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 TMEM161AQ9NX61 479 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 LMCD1Q9NZU5 365 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PRKAB1Q9Y478 270 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 DNAH14Q0VDD8 3507 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 TBC1D3BA6NDS4 549 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 SLC38A8A6NNN8 435 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 UPK3BL1B0FP48 263 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PRR5-ARHGAP8B1AHC4 643 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 UPK3BL2E5RIL1 263 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 SPECC1L-ADORA2AF8WAN1 911 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 INPPL1O15357 1258 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 MAP3K7O43318 606 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 SEC24DO94855 1032 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PROCP04070 461 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 NNMTP40261 264 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 CDKN1CP49918 316 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-203ENST00000378037 SERPINH1P50454 418 aaKnown RBP8.18□□□□□ -1.1
CKAP2-203ENST00000378037 ARHGAP8P85298 464 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PLA2G4EQ3MJ16 856 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 GRASPQ7Z6J2 395 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-203ENST00000378037 C11orf74Q86VG3 221 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 SLAIN1Q8ND83 568 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 CLHC1Q8NHS4 586 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 TRPC4APQ8TEL6 797 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PBXIP1Q96AQ6 731 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 MYEOVQ96EZ4 313 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 APOPT1Q96IL0 206 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 SUSD3Q96L08 255 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 MAGEB18Q96M61 343 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 ACOX2Q99424 681 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 CAPN10Q9HC96 672 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 ABCB8Q9NUT2 735 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 GDAP2Q9NXN4 497 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 NENFQ9UMX5 172 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 A6NNZ2 444 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PMM2O15305 246 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 CHADO15335 359 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PEX11AO75192 247 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 GLP2RO95838 553 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PGAM1P18669 254 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 FGFR3P22607 806 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 MAT2AP31153 395 aaKnown RBP8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PTPN9P43378 593 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 GEMP55040 296 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 HADHBP55084 474 aaKnown RBP8.18□□□□□ -1.1
CKAP2-203ENST00000378037 ZBTB6Q15916 424 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 TUBB8Q3ZCM7 444 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 MS4A13Q5J8X5 152 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 ZNF648Q5T619 568 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PARP9Q8IXQ6 854 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 KLHL23Q8NBE8 558 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PYCR2Q96C36 320 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 NFKBIZQ9BYH8 718 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 POMKQ9H5K3 350 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 AAR2Q9Y312 384 aaKnown RBP8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PTGDR2Q9Y5Y4 395 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 PRRC2CQ9Y520 2896 aaKnown RBP8.18□□□□□ -1.1
CKAP2-203ENST00000378037 SHROOM3Q8TF72 1996 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 NVLO15381 856 aaKnown RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 TEX28O15482 410 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 IL1BP01584 269 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 NELFEP18615 380 aaKnown RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 CD151P48509 253 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 NR2C2P49116 596 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 TUFMP49411 452 aaKnown RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 TAF11Q15544 211 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 TRIM74Q86UV6 250 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 PYDC1Q8WXC3 89 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 RTP3Q9BQQ7 232 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 POLR1EQ9GZS1 481 aaKnown RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 RNF38Q9H0F5 515 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 NOD2Q9HC29 1040 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 SLCO3A1Q9UIG8 710 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 FKBPLQ9UIM3 349 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 RNF112Q9ULX5 631 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 YIPF1Q9Y548 306 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 ZNFX1Q9P2E3 1918 aaKnown RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 FAM155AB1AL88 458 aaPredicted RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 COCHO43405 550 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 DCTN3O75935 186 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 CABYRO75952 493 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 USP1O94782 785 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 ZWINTO95229 277 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 GRIA4P48058 902 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 ARSDP51689 593 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 CASP9P55211 416 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms