RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TBC1D3DA0A087WVF3 549 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 TBC1D3IA0A087WXS9 549 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 TBC1D3EA0A087X179 549 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 TBC1D3KA0A087X1G2 549 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 TBC1D3FA6NER0 549 aaPredicted RBP13.38□□□□□ -0.27
CKAP2-202ENST00000378034 TBC1D3LB9A6J9 549 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 H7C0C1 242 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 PLK4O00444 970 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 PIGNO95427 931 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 HLA-DQB2P05538 268 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 TBC1D3HP0C7X1 549 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 NUDT1P36639 197 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 PLA2G5P39877 138 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 ATP5OP48047 213 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 EIF3EP60228 445 aaKnown RBP13.38□□□□□ -0.27
CKAP2-202ENST00000378034 MAXP61244 160 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 POLR2LP62875 67 aaKnown RBP13.38□□□□□ -0.27
CKAP2-202ENST00000378034 TEX44Q53QW1 395 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 KIAA0895LQ68EN5 471 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 TBC1D3GQ6DHY5 549 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 TBC1D3CQ6IPX1 549 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 CYP2U1Q7Z449 544 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 SLC13A5Q86YT5 568 aaPredicted RBP13.38□□□□□ -0.27
CKAP2-202ENST00000378034 CAMK1DQ8IU85 385 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 TBC1D3Q8IZP1 549 aaPredicted RBP13.38□□□□□ -0.27
CKAP2-202ENST00000378034 LRRN4Q8WUT4 740 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 HTR3CQ8WXA8 447 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 DNASE2BQ8WZ79 361 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 RUBCNQ92622 972 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 ECHDC3Q96DC8 303 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 HSPA12BQ96MM6 686 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 SEMA3CQ99985 751 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 C6orf106Q9H6K1 298 aaPredicted RBP13.38□□□□□ -0.27
CKAP2-202ENST00000378034 NOD2Q9HC29 1040 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 NCDNQ9UBB6 729 aa13.38□□□□□ -0.27
CKAP2-202ENST00000378034 ANKRD36A6QL64 1941 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 BCLAF3A2AJT9 711 aaKnown RBP13.37□□□□□ -0.27
CKAP2-202ENST00000378034 MEI4A8MW99 385 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 TRAFD1O14545 582 aaPredicted RBP13.37□□□□□ -0.27
CKAP2-202ENST00000378034 HTRA2O43464 458 aaPredicted RBP13.37□□□□□ -0.27
CKAP2-202ENST00000378034 CA4P22748 312 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 PTGER3P43115 390 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 TAS2R38P59533 333 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 ZBTB17Q13105 803 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 PEAR1Q5VY43 1037 aaPredicted RBP13.37□□□□□ -0.27
CKAP2-202ENST00000378034 RABEPKQ7Z6M1 372 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 TTC7BQ86TV6 843 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 TRIM69Q86WT6 500 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 SLC35F6Q8N357 371 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 CNTD1Q8N815 330 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 MAIP1Q8WWC4 291 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 SEPT10Q9P0V9 454 aa13.37□□□□□ -0.27
CKAP2-202ENST00000378034 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.37□□□□□ -0.27
CKAP2-202ENST00000378034 USP27XA6NNY8 438 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 TSPAN6O43657 245 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 SERPINF2P08697 491 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 RBP3P10745 1247 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 TIMP2P16035 220 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 XPAP23025 273 aaPredicted RBP13.36□□□□□ -0.27
CKAP2-202ENST00000378034 NFKBIAP25963 317 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 PTPN3P26045 913 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 CREB5Q02930 508 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 ELP6Q0PNE2 266 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 SLC14A2Q15849 920 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 UGP2Q16851 508 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 ASCL5Q7RTU5 278 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 SYT12Q8IV01 421 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 DEFB119Q8N690 84 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 ARRDC2Q8TBH0 407 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 PBKQ96KB5 322 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 TEKT5Q96M29 485 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 SUSD2Q9UGT4 822 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 PILRBQ9UKJ0 227 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 TRHDEQ9UKU6 1024 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 TTLL3Q9Y4R7 772 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 FADS3Q9Y5Q0 445 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 FAM47DPA6NHR8 397 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 UPK3BL1B0FP48 263 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 UPK3BL2E5RIL1 263 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 AREL1O15033 823 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 LATO43561 262 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 FSBPO95073 299 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 WASHC5Q12768 1159 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 KIAA1161Q6NSJ0 714 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 ERAP2Q6P179 960 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 DARS2Q6PI48 645 aaKnown RBP13.36□□□□□ -0.27
CKAP2-202ENST00000378034 ARMCX6Q7L4S7 300 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 GPR161Q8N6U8 529 aaKnown RBP13.36□□□□□ -0.27
CKAP2-202ENST00000378034 CEP76Q8TAP6 659 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 BIRC7Q96CA5 298 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 FEM1CQ96JP0 617 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 NSMCE3Q96MG7 304 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 SLC25A51Q9H1U9 297 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 ARRDC1-AS1Q9H2J1 176 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 GLOD4Q9HC38 313 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 ZKSCAN5Q9Y2L8 839 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 PCDHGC4Q9Y5F7 938 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 NUMA1Q14980 2115 aa13.36□□□□□ -0.27
CKAP2-202ENST00000378034 TTC24A2A3L6 582 aaPredicted RBP13.35□□□□□ -0.27
CKAP2-202ENST00000378034 ENC1O14682 589 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms