RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 SDE2Q6IQ49 451 aa21.51■■□□□ 1.03
CBWD3-202ENST00000377342 LRRC45Q96CN5 670 aa21.51■■□□□ 1.03
CBWD3-202ENST00000377342 TRIB3Q96RU7 358 aa21.51■■□□□ 1.03
CBWD3-202ENST00000377342 RSPH9Q9H1X1 276 aaPredicted RBP21.51■■□□□ 1.03
CBWD3-202ENST00000377342 EPC1Q9H2F5 836 aa21.51■■□□□ 1.03
CBWD3-202ENST00000377342 ATP13A3Q9H7F0 1226 aa21.51■■□□□ 1.03
CBWD3-202ENST00000377342 EIF2B3Q9NR50 452 aaKnown RBP21.51■■□□□ 1.03
CBWD3-202ENST00000377342 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.51■■□□□ 1.03
CBWD3-202ENST00000377342 PPM1HQ9ULR3 514 aa21.51■■□□□ 1.03
CBWD3-202ENST00000377342 AAR2Q9Y312 384 aaKnown RBP21.51■■□□□ 1.03
CBWD3-202ENST00000377342 RAI2Q9Y5P3 530 aa21.51■■□□□ 1.03
CBWD3-202ENST00000377342 V9GYY5 206 aaPredicted RBP21.51■■□□□ 1.03
CBWD3-202ENST00000377342 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.5■■□□□ 1.03
CBWD3-202ENST00000377342 STK25O00506 426 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 FZD6O60353 706 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 SOCS5O75159 536 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 UGT2B4P06133 528 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 TPSB2P20231 275 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 ADRA1AP35348 466 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 RPS9P46781 194 aaKnown RBP21.5■■□□□ 1.03
CBWD3-202ENST00000377342 GUCY2DQ02846 1103 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 SPARCL1Q14515 664 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 STARD3Q14849 445 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 TPSAB1Q15661 275 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 ARSIQ5FYB1 569 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 ZSWIM9Q86XI8 627 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 NAT8LQ8N9F0 302 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 ECHDC3Q96DC8 303 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 PPP1R2P1Q96PQ5 205 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 MKRN2Q9H000 416 aaKnown RBP21.5■■□□□ 1.03
CBWD3-202ENST00000377342 MFSD1Q9H3U5 465 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 DLGAP2Q9P1A6 1054 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 TPX2Q9ULW0 747 aaKnown RBP21.5■■□□□ 1.03
CBWD3-202ENST00000377342 SIT1Q9Y3P8 196 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 HTRA2O43464 458 aaPredicted RBP21.5■■□□□ 1.03
CBWD3-202ENST00000377342 SYNCRIPO60506 623 aaKnown RBP21.5■■□□□ 1.03
CBWD3-202ENST00000377342 USP12O75317 370 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 PRLP01236 227 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 DCNP07585 359 aaKnown RBP21.5■■□□□ 1.03
CBWD3-202ENST00000377342 SERPINA4P29622 427 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 BCL2L1Q07817 233 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 CRY1Q16526 586 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 ZNF534Q76KX8 674 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 SYT13Q7L8C5 426 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 OR2T3Q8NH03 318 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 PRCCQ92733 491 aaPredicted RBP21.5■■□□□ 1.03
CBWD3-202ENST00000377342 SLC6A17Q9H1V8 727 aa21.5■■□□□ 1.03
CBWD3-202ENST00000377342 TMEM221A6NGB7 291 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 E7EVH7 732 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 M0R296 226 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 SUN1O94901 812 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 PDHA1P08559 390 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 C7P10643 843 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 ALADP13716 330 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 GRIA1P42261 906 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 ITGA8P53708 1063 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 RAD51Q06609 339 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 GRM3Q14832 879 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 HIBCHQ6NVY1 386 aaPredicted RBP21.49■■□□□ 1.03
CBWD3-202ENST00000377342 GDPD4Q6W3E5 623 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 CACUL1Q86Y37 369 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 MMAAQ8IVH4 418 aaKnown RBP21.49■■□□□ 1.03
CBWD3-202ENST00000377342 PPIL6Q8IXY8 311 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 PIP4K2CQ8TBX8 421 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 LRIG1Q96JA1 1093 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 FEM1CQ96JP0 617 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 APOL2Q9BQE5 337 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 FICDQ9BVA6 458 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 ANKZF1Q9H8Y5 726 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 LRRC40Q9H9A6 602 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 EPB41L5Q9HCM4 733 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 WHRNQ9P202 907 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 CHKBQ9Y259 395 aa21.49■■□□□ 1.03
CBWD3-202ENST00000377342 TSPAN11A1L157 253 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 ERI2A8K979 691 aaKnown RBP21.48■■□□□ 1.03
CBWD3-202ENST00000377342 PI15O43692 258 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 PGLSO95336 258 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 PRNPP04156 253 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 ATXN1LP0C7T5 689 aaKnown RBP21.48■■□□□ 1.03
CBWD3-202ENST00000377342 CHRNA4P43681 627 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 PSMD8P48556 350 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 SATB1Q01826 763 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 POM121L1PQ3SYA9 428 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 ZDHHC24Q6UX98 284 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 KDELC2Q7Z4H8 507 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 TMIEQ8NEW7 156 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 SPOCK2Q92563 424 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 ZNF641Q96N77 438 aaPredicted RBP21.48■■□□□ 1.03
CBWD3-202ENST00000377342 KLHL32Q96NJ5 620 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 OSBPL1AQ9BXW6 950 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 SUV39H2Q9H5I1 410 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 FBRSQ9HAH7 460 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 GDF3Q9NR23 364 aa21.48■■□□□ 1.03
CBWD3-202ENST00000377342 LOC285095A0A1B0GVY8 99 aa21.47■■□□□ 1.03
CBWD3-202ENST00000377342 GOLGA6CA6NDK9 693 aa21.47■■□□□ 1.03
CBWD3-202ENST00000377342 GOLGA6BA6NDN3 693 aa21.47■■□□□ 1.03
CBWD3-202ENST00000377342 AGTP01019 485 aa21.47■■□□□ 1.03
CBWD3-202ENST00000377342 IL1BP01584 269 aa21.47■■□□□ 1.03
CBWD3-202ENST00000377342 GOLGA6DP0CG33 693 aa21.47■■□□□ 1.03
CBWD3-202ENST00000377342 DRG2P55039 364 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms