RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 A0A1W2PQU0 124 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 SOWAHDA6NJG2 315 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 E9PAM4 449 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 EPHB6O15197 1021 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 CASC3O15234 703 aaKnown RBP9.73□□□□□ -0.85
C9orf85-202ENST00000377027 RAD51BO15315 384 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 YKT6O15498 198 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 SIGLEC6O43699 453 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 GJB6O95452 261 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 FGFR1OPO95684 399 aaKnown RBP9.73□□□□□ -0.85
C9orf85-202ENST00000377027 MMEP08473 750 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 ACP1P24666 158 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 CHRNA3P32297 505 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 NNMTP40261 264 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 MTIF2P46199 727 aaKnown RBP9.73□□□□□ -0.85
C9orf85-202ENST00000377027 KLK7P49862 253 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 RNASE9P60153 205 aaKnown RBP9.73□□□□□ -0.85
C9orf85-202ENST00000377027 UBE2HP62256 183 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 NOMO3P69849 1222 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 ACAP1Q15027 740 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 BRMS1LQ5PSV4 323 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 PERM1Q5SV97 790 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 FAM102AQ5T9C2 384 aaPredicted RBP9.73□□□□□ -0.85
C9orf85-202ENST00000377027 KLHDC7AQ5VTJ3 777 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 TAF3Q5VWG9 929 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 DPY19L3Q6ZPD9 716 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 PRPF39Q86UA1 669 aaKnown RBP9.73□□□□□ -0.85
C9orf85-202ENST00000377027 FAM131BQ86XD5 332 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 EMC1Q8N766 993 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 ATP11CQ8NB49 1132 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 SLC20A1Q8WUM9 679 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 NUDT8Q8WV74 236 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 RFFLQ8WZ73 363 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 TRIM11Q96F44 468 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 BMFQ96LC9 184 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 FAM81BQ96LP2 452 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 NSUN5Q96P11 429 aaKnown RBP9.73□□□□□ -0.85
C9orf85-202ENST00000377027 MUC3BQ9H195 1237 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 GANQ9H2C0 597 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 SUV39H2Q9H5I1 410 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 SAMSN1Q9NSI8 373 aaKnown RBP9.73□□□□□ -0.85
C9orf85-202ENST00000377027 FRRS1LQ9P0K9 344 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 SLC12A6Q9UHW9 1150 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 GGT7Q9UJ14 662 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 NOCTQ9UK39 431 aaKnown RBP9.73□□□□□ -0.85
C9orf85-202ENST00000377027 PNMA8BQ9ULN7 279 aaPredicted RBP9.73□□□□□ -0.85
C9orf85-202ENST00000377027 ANKRD36A6QL64 1941 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 RP1P56715 2156 aa9.73□□□□□ -0.85
C9orf85-202ENST00000377027 SETXQ7Z333 2677 aaKnown RBP9.72□□□□□ -0.85
C9orf85-202ENST00000377027 POM121BA6NF01 834 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 C1QTNF3-AMACRE9PGA6 284 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 F8VZ95 297 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 FAM72CH0Y354 149 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 PRAMEF26H0Y7S4 382 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 GOLGA8SH3BPF8 625 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 J3QW42 95 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 KPNA3O00505 521 aaPredicted RBP9.72□□□□□ -0.85
C9orf85-202ENST00000377027 SLC31A1O15431 190 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 LEFTY1O75610 366 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 C1QL1O75973 258 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 ENDOD1O94919 500 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 C1SP09871 688 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 THEGLP0DJG4 465 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 CKMT2P17540 419 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 CHRNB2P17787 502 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 DGKAP23743 735 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 GKP32189 559 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 KRT9P35527 623 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 ACVRL1P37023 503 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 EIF2S3P41091 472 aaKnown RBP9.72□□□□□ -0.85
C9orf85-202ENST00000377027 ARRB1P49407 418 aaPredicted RBP9.72□□□□□ -0.85
C9orf85-202ENST00000377027 OXCT1P55809 520 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 DEUP1Q05D60 604 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 PTP4A2Q12974 167 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 RTP5Q14D33 572 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 SLC25A52Q3SY17 297 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 VWA3BQ502W6 1294 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 SETMARQ53H47 684 aaPredicted RBP9.72□□□□□ -0.85
C9orf85-202ENST00000377027 FAM72AQ5TYM5 149 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 FAM46CQ5VWP2 391 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 FAM72DQ6L9T8 149 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 PARS2Q7L3T8 475 aaKnown RBP9.72□□□□□ -0.85
C9orf85-202ENST00000377027 ABI3BPQ7Z7G0 1075 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 DSG4Q86SJ6 1040 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 SETD3Q86TU7 594 aaPredicted RBP9.72□□□□□ -0.85
C9orf85-202ENST00000377027 NLRP14Q86W24 1093 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 HORMAD1Q86X24 394 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 FAM72BQ86X60 149 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 ZDHHC17Q8IUH5 632 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 OXR1Q8N573 874 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 MLKLQ8NB16 471 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 TMIEQ8NEW7 156 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 JOSD2Q8TAC2 188 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 GRIN3AQ8TCU5 1115 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 C1orf74Q96LT6 269 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 TUBGCP2Q9BSJ2 902 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 CLSTN2Q9H4D0 955 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 WDCPQ9H6R7 721 aa9.72□□□□□ -0.85
C9orf85-202ENST00000377027 TPX2Q9ULW0 747 aaKnown RBP9.72□□□□□ -0.85
C9orf85-202ENST00000377027 PCDHB1Q9Y5F3 818 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms