RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 XPAP23025 273 aaPredicted RBP21.3■■□□□ 1
VSX1-201ENST00000376707 THOP1P52888 689 aa21.3■■□□□ 1
VSX1-201ENST00000376707 TPI1P60174 286 aa21.3■■□□□ 1
VSX1-201ENST00000376707 PFN3P60673 137 aa21.3■■□□□ 1
VSX1-201ENST00000376707 IQCB1Q15051 598 aa21.3■■□□□ 1
VSX1-201ENST00000376707 VPS36Q86VN1 386 aa21.3■■□□□ 1
VSX1-201ENST00000376707 DONSONQ9NYP3 566 aa21.3■■□□□ 1
VSX1-201ENST00000376707 DKK3Q9UBP4 350 aa21.3■■□□□ 1
VSX1-201ENST00000376707 CSNK1G3Q9Y6M4 447 aa21.3■■□□□ 1
VSX1-201ENST00000376707 URB1O60287 2271 aaKnown RBP21.29■■□□□ 1
VSX1-201ENST00000376707 LRRC53A6NM62 1247 aa21.29■■□□□ 1
VSX1-201ENST00000376707 TMCO5BA8MYB1 307 aa21.29■■□□□ 1
VSX1-201ENST00000376707 AQP9O43315 295 aa21.29■■□□□ 1
VSX1-201ENST00000376707 TLX3O43711 291 aaPredicted RBP21.29■■□□□ 1
VSX1-201ENST00000376707 OPA1O60313 960 aa21.29■■□□□ 1
VSX1-201ENST00000376707 TM7SF2O76062 418 aa21.29■■□□□ 1
VSX1-201ENST00000376707 GP1BAP07359 652 aa21.29■■□□□ 1
VSX1-201ENST00000376707 HTR7P34969 479 aa21.29■■□□□ 1
VSX1-201ENST00000376707 OGDHQ02218 1023 aa21.29■■□□□ 1
VSX1-201ENST00000376707 COL9A2Q14055 689 aaPredicted RBP21.29■■□□□ 1
VSX1-201ENST00000376707 PTK2BQ14289 1009 aa21.29■■□□□ 1
VSX1-201ENST00000376707 TPRG1LQ5T0D9 272 aa21.29■■□□□ 1
VSX1-201ENST00000376707 ZCCHC8Q6NZY4 707 aaKnown RBP21.29■■□□□ 1
VSX1-201ENST00000376707 LRRC69Q6ZNQ3 347 aa21.29■■□□□ 1
VSX1-201ENST00000376707 LMX1AQ8TE12 382 aa21.29■■□□□ 1
VSX1-201ENST00000376707 BTN2A2Q8WVV5 523 aa21.29■■□□□ 1
VSX1-201ENST00000376707 CENPTQ96BT3 561 aa21.29■■□□□ 1
VSX1-201ENST00000376707 EXOC2Q96KP1 924 aa21.29■■□□□ 1
VSX1-201ENST00000376707 ABCG4Q9H172 646 aa21.29■■□□□ 1
VSX1-201ENST00000376707 PARVAQ9NVD7 372 aa21.29■■□□□ 1
VSX1-201ENST00000376707 TAS2R14Q9NYV8 317 aa21.29■■□□□ 1
VSX1-201ENST00000376707 AIPL1Q9NZN9 384 aa21.29■■□□□ 1
VSX1-201ENST00000376707 LHX3Q9UBR4 397 aa21.29■■□□□ 1
VSX1-201ENST00000376707 UBA2Q9UBT2 640 aaPredicted RBP21.29■■□□□ 1
VSX1-201ENST00000376707 KLF15Q9UIH9 416 aa21.29■■□□□ 1
VSX1-201ENST00000376707 KNTC1P50748 2209 aa21.28■■□□□ 1
VSX1-201ENST00000376707 RRP8O43159 456 aaKnown RBP21.28■■□□□ 1
VSX1-201ENST00000376707 BRINP1O60477 761 aa21.28■■□□□ 1
VSX1-201ENST00000376707 TIMP2P16035 220 aa21.28■■□□□ 1
VSX1-201ENST00000376707 PSMA2P25787 234 aa21.28■■□□□ 1
VSX1-201ENST00000376707 IGFALSP35858 605 aa21.28■■□□□ 1
VSX1-201ENST00000376707 EIF2S3P41091 472 aaKnown RBP21.28■■□□□ 1
VSX1-201ENST00000376707 EIF2B5Q13144 721 aaKnown RBP21.28■■□□□ 1
VSX1-201ENST00000376707 MAMLD1Q13495 774 aa21.28■■□□□ 1
VSX1-201ENST00000376707 CYTH1Q15438 398 aa21.28■■□□□ 1
VSX1-201ENST00000376707 NAP1L5Q96NT1 182 aaPredicted RBP21.28■■□□□ 1
VSX1-201ENST00000376707 DEPDC7Q96QD5 511 aa21.28■■□□□ 1
VSX1-201ENST00000376707 WRAP53Q9BUR4 548 aaKnown RBP21.28■■□□□ 1
VSX1-201ENST00000376707 CPEB1Q9BZB8 566 aaKnown RBP21.28■■□□□ 1
VSX1-201ENST00000376707 GPATCH2LQ9NWQ4 482 aa21.28■■□□□ 1
VSX1-201ENST00000376707 NCKIPSDQ9NZQ3 722 aa21.28■■□□□ 1
VSX1-201ENST00000376707 AP4E1Q9UPM8 1137 aa21.28■■□□□ 1
VSX1-201ENST00000376707 LY6G6EA0A0G2JKS1 128 aa21.27■■□□□ 1
VSX1-201ENST00000376707 INSIG1O15503 277 aa21.27■■□□□ 1
VSX1-201ENST00000376707 PIGNO95427 931 aa21.27■■□□□ 1
VSX1-201ENST00000376707 ITIH2P19823 946 aa21.27■■□□□ 1
VSX1-201ENST00000376707 PRKCIP41743 596 aa21.27■■□□□ 1
VSX1-201ENST00000376707 SUOXP51687 545 aa21.27■■□□□ 1
VSX1-201ENST00000376707 NDST2P52849 883 aa21.27■■□□□ 1
VSX1-201ENST00000376707 YPEL5P62699 121 aa21.27■■□□□ 1
VSX1-201ENST00000376707 ELP6Q0PNE2 266 aa21.27■■□□□ 1
VSX1-201ENST00000376707 NR1I3Q14994 352 aa21.27■■□□□ 1
VSX1-201ENST00000376707 KLHL40Q2TBA0 621 aa21.27■■□□□ 1
VSX1-201ENST00000376707 DEFB133Q30KQ1 61 aa21.27■■□□□ 1
VSX1-201ENST00000376707 DNAAF5Q86Y56 855 aa21.27■■□□□ 1
VSX1-201ENST00000376707 IFI44Q8TCB0 444 aa21.27■■□□□ 1
VSX1-201ENST00000376707 MAPK15Q8TD08 544 aa21.27■■□□□ 1
VSX1-201ENST00000376707 CRELD1Q96HD1 420 aa21.27■■□□□ 1
VSX1-201ENST00000376707 IL12RB2Q99665 862 aa21.27■■□□□ 1
VSX1-201ENST00000376707 EDEM3Q9BZQ6 932 aa21.27■■□□□ 1
VSX1-201ENST00000376707 DHX35Q9H5Z1 703 aaKnown RBP21.27■■□□□ 1
VSX1-201ENST00000376707 LRRC19Q9H756 370 aa21.27■■□□□ 1
VSX1-201ENST00000376707 SPASTQ9UBP0 616 aa21.27■■□□□ 1
VSX1-201ENST00000376707 APOBEC3BQ9UH17 382 aaKnown RBP21.27■■□□□ 1
VSX1-201ENST00000376707 PCDHB1Q9Y5F3 818 aa21.27■■□□□ 1
VSX1-201ENST00000376707 U3KQA8 63 aa21.27■■□□□ 1
VSX1-201ENST00000376707 NBEAQ8NFP9 2946 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 EIF3CLB5ME19 914 aaKnown RBP21.26■□□□□ 0.99
VSX1-201ENST00000376707 EEF2KO00418 725 aaKnown RBP21.26■□□□□ 0.99
VSX1-201ENST00000376707 DAPK3O43293 454 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 ATMINO43313 823 aaPredicted RBP21.26■□□□□ 0.99
VSX1-201ENST00000376707 GZMAP12544 262 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 ITPKBP27987 946 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 ACTN2P35609 894 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 GRM3Q14832 879 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 ASIC2Q16515 512 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 CDKN3Q16667 212 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 SOWAHCQ53LP3 525 aaPredicted RBP21.26■□□□□ 0.99
VSX1-201ENST00000376707 CFAP58Q5T655 872 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 CDCP2Q5VXM1 449 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 E4F1Q66K89 784 aaPredicted RBP21.26■□□□□ 0.99
VSX1-201ENST00000376707 PLEKHA7Q6IQ23 1121 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 PHACTR4Q8IZ21 702 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 RBFAQ8N0V3 343 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 SNIP1Q8TAD8 396 aaKnown RBP21.26■□□□□ 0.99
VSX1-201ENST00000376707 FGF11Q92914 225 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 CELF6Q96J87 481 aaKnown RBP21.26■□□□□ 0.99
VSX1-201ENST00000376707 EIF3CQ99613 913 aaKnown RBP21.26■□□□□ 0.99
VSX1-201ENST00000376707 HAUS4Q9H6D7 363 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 PDFQ9HBH1 243 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms