RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 H3BMQ9 156 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 AKAP10O43572 662 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TPST1O60507 370 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 FUCA1P04066 466 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 ATP6V1B2P21281 511 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 NUP107P57740 925 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 CD300CQ08708 224 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 USP10Q14694 798 aaKnown RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 AGKQ53H12 422 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 DCAF6Q58WW2 860 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 LRRC8EQ6NSJ5 796 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 NANOGP8Q6NSW7 305 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TMEM26Q6ZUK4 368 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 EPHX4Q8IUS5 362 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 PELI3Q8N2H9 469 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 CBR4Q8N4T8 237 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 GFM2Q969S9 779 aaKnown RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 COG8Q96MW5 612 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 NPLQ9BXD5 320 aaPredicted RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 RPF2Q9H7B2 306 aaKnown RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 FANCFQ9NPI8 374 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 DPP3Q9NY33 737 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 GTSE1Q9NYZ3 720 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 SELENONQ9NZV5 590 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 IPO11Q9UI26 975 aaKnown RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TIMM22Q9Y584 194 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 A0A1W2PQ67 120 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 ZNF487B1APH4 448 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 J3QRK9 145 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 ZBTB24O43167 697 aaPredicted RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 H2AFYO75367 372 aaKnown RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 ARL4AP40617 200 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 PTPN9P43378 593 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 C1QTNF8P60827 252 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TUBA4AP68366 448 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 RELAQ04206 551 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TMEM132DQ14C87 1099 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 ZBED5Q49AG3 693 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 NBPF12Q5TAG4 269 aaPredicted RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TBC1D15Q8TC07 691 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 STYXQ8WUJ0 223 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 SLC35B4Q969S0 331 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 FBXL8Q96CD0 374 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 FBXL20Q96IG2 436 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 RPL10LQ96L21 214 aaKnown RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 ZMAT2Q96NC0 199 aaKnown RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 MLPHQ9BV36 600 aaPredicted RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 UNC93B1Q9H1C4 597 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 SOX17Q9H6I2 414 aaPredicted RBP11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TLK1Q9UKI8 766 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 FZD10Q9ULW2 581 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 ADAMTS5Q9UNA0 930 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 TNFSF13BQ9Y275 285 aa11.61□□□□□ -0.55
TM9SF2-201ENST00000376387 HEATR9A2RTY3 570 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 HACD1B0YJ81 288 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 FAM72CH0Y354 149 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 H0YJX3 145 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 SLC22A2O15244 555 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 CABYRO75952 493 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 PGK1P00558 417 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 PORP16435 677 aaPredicted RBP11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 SLC7A1P30825 629 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 GRIA3P42263 894 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 YAP1P46937 504 aaKnown RBP11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 GLUD2P49448 558 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 CSRP3P50461 194 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 EN1Q05925 392 aaPredicted RBP11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 BNIP3Q12983 259 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 AARS2Q5JTZ9 985 aaKnown RBP11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 FAM72AQ5TYM5 149 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 FAM160B1Q5W0V3 765 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 FAM72DQ6L9T8 149 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 EFCAB12Q6NXP0 572 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 TTC33Q6PID6 262 aaPredicted RBP11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 NCCRP1Q6ZVX7 275 aaPredicted RBP11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 FAM72BQ86X60 149 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 OFCC1Q8IZS5 231 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 PNPLA1Q8N8W4 532 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 HM13Q8TCT9 377 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 STON2Q8WXE9 905 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 ZBED3Q96IU2 234 aaPredicted RBP11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 TRIM8Q9BZR9 551 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 CD300AQ9UGN4 299 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 GTF2IRD1Q9UHL9 959 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 SHROOM3Q8TF72 1996 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 NUP205Q92621 2012 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 IGKV6-21A0A0C4DH24 114 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 SERPINB7O75635 380 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 DDHD2O94830 711 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 ZBTB11O95625 1053 aaPredicted RBP11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 HSPA8P11142 646 aaKnown RBP11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 PTPRAP18433 802 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 PTPN3P26045 913 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 CD68P34810 354 aaPredicted RBP11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 MPP1Q00013 466 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 ATP1A4Q13733 1029 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 IL31Q6EBC2 164 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 ZC3HC1Q86WB0 502 aaKnown RBP11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 DENND6AQ8IWF6 608 aa11.6□□□□□ -0.55
TM9SF2-201ENST00000376387 TXNDC5Q8NBS9 432 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms