RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 RBBP8Q99708 897 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 SELENOSQ9BQE4 189 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 GMNCA6NCL1 334 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 PER2O15055 1255 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 HOXC11O43248 304 aaPredicted RBP11.22□□□□□ -0.61
PDPN-202ENST00000376057 TIMM44O43615 452 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 ATP9BO43861 1147 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 GSRP00390 522 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 DHRS4L1P0CG22 281 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 HOXB8P17481 243 aaPredicted RBP11.22□□□□□ -0.61
PDPN-202ENST00000376057 KRT4P19013 534 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 SPRP35270 261 aaPredicted RBP11.22□□□□□ -0.61
PDPN-202ENST00000376057 NRIP1P48552 1158 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 LIMK2P53671 638 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 PDE1BQ01064 536 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 SRLQ86TD4 932 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 RIN3Q8TB24 985 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 MFSD3Q96ES6 412 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 MAGEB18Q96M61 343 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 ZNF317Q96PQ6 595 aaPredicted RBP11.22□□□□□ -0.61
PDPN-202ENST00000376057 TUBGCP5Q96RT8 1024 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 ADGRE3Q9BY15 652 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 SLC28A3Q9HAS3 691 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.22□□□□□ -0.61
PDPN-202ENST00000376057 C2orf16Q68DN1 1984 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 LDB2O43679 373 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 SOCS5O75159 536 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 PRAMEF12O95522 483 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 CREB1P16220 341 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 TPH1P17752 444 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 CRHR1P34998 444 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 GRM3Q14832 879 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 ARID3BQ8IVW6 561 aaPredicted RBP11.22□□□□□ -0.61
PDPN-202ENST00000376057 OSCP1Q8WVF1 389 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 SERAC1Q96JX3 654 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 ZSWIM3Q96MP5 696 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 APOL2Q9BQE5 337 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 TRIM56Q9BRZ2 755 aaKnown RBP11.22□□□□□ -0.61
PDPN-202ENST00000376057 HACD3Q9P035 362 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 GGA2Q9UJY4 613 aa11.22□□□□□ -0.61
PDPN-202ENST00000376057 A0A1W2PQ67 120 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 TRIM49D1C9J1S8 452 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 FAM107AO95990 144 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 PRLP01236 227 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 ARNTP27540 789 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 PITRM1Q5JRX3 1037 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 CCDC91Q7Z6B0 441 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 APCDD1Q8J025 514 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 C2CD4AQ8NCU7 369 aaPredicted RBP11.21□□□□□ -0.61
PDPN-202ENST00000376057 MDM1Q8TC05 714 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 STYXQ8WUJ0 223 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 CPEB1Q9BZB8 566 aaKnown RBP11.21□□□□□ -0.61
PDPN-202ENST00000376057 VPS11Q9H270 941 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 MFSD1Q9H3U5 465 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 NSUN3Q9H649 340 aaKnown RBP11.21□□□□□ -0.61
PDPN-202ENST00000376057 PIDD1Q9HB75 910 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 C20orf96Q9NUD7 363 aaPredicted RBP11.21□□□□□ -0.61
PDPN-202ENST00000376057 PIH1D1Q9NWS0 290 aaKnown RBP11.21□□□□□ -0.61
PDPN-202ENST00000376057 SLC27A6Q9Y2P4 619 aa11.21□□□□□ -0.61
PDPN-202ENST00000376057 HTRA2O43464 458 aaPredicted RBP11.21□□□□□ -0.62
PDPN-202ENST00000376057 SNAP91O60641 907 aa11.21□□□□□ -0.62
PDPN-202ENST00000376057 CRTAMO95727 393 aa11.21□□□□□ -0.62
PDPN-202ENST00000376057 MPOP05164 745 aa11.21□□□□□ -0.62
PDPN-202ENST00000376057 GSTA1P08263 222 aa11.21□□□□□ -0.62
PDPN-202ENST00000376057 ITGA2BP08514 1039 aa11.21□□□□□ -0.62
PDPN-202ENST00000376057 ERVK-10P10266 1014 aa11.21□□□□□ -0.62
PDPN-202ENST00000376057 RGRP47804 291 aa11.21□□□□□ -0.62
PDPN-202ENST00000376057 NTHL1P78549 312 aa11.21□□□□□ -0.62
PDPN-202ENST00000376057 IL9RQ01113 521 aa11.21□□□□□ -0.62
PDPN-202ENST00000376057 TAF1AQ15573 450 aaPredicted RBP11.21□□□□□ -0.62
PDPN-202ENST00000376057 WFIKKN2Q8TEU8 576 aa11.21□□□□□ -0.62
PDPN-202ENST00000376057 KCNK9Q9NPC2 374 aa11.21□□□□□ -0.62
PDPN-202ENST00000376057 INTS6Q9UL03 887 aaKnown RBP11.21□□□□□ -0.62
PDPN-202ENST00000376057 PPIL1Q9Y3C6 166 aa11.21□□□□□ -0.62
PDPN-202ENST00000376057 EPOPA6NHQ4 379 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 ZNF821O75541 412 aaPredicted RBP11.2□□□□□ -0.62
PDPN-202ENST00000376057 IL1BP01584 269 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 FSHRP23945 695 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 CD70P32970 193 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 ETV4P43268 484 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 GRIA4P48058 902 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 POU6F1Q14863 301 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 PCSK7Q16549 785 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 ANKRD54Q6NXT1 300 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 TMEM25Q86YD3 366 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 KDM1BQ8NB78 822 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 OR13J1Q8NGT2 312 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 ITFG1Q8TB96 612 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 RAB3IL1Q8TBN0 382 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 SMARCD2Q92925 531 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 CHMP6Q96FZ7 201 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 NSMCE3Q96MG7 304 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 ASB16Q96NS5 453 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 GPR22Q99680 433 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 SMG9Q9H0W8 520 aaKnown RBP11.2□□□□□ -0.62
PDPN-202ENST00000376057 RHOJQ9H4E5 214 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 NLE1Q9NVX2 485 aaPredicted RBP11.2□□□□□ -0.62
PDPN-202ENST00000376057 TXNDC16Q9P2K2 825 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 DCDC2Q9UHG0 476 aa11.2□□□□□ -0.62
PDPN-202ENST00000376057 CORO1CQ9ULV4 474 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms