RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TREX1Q9NSU2 369 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 NEU3Q9UQ49 428 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 LZTS1Q9Y250 596 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 PRSS51A0A1B0GVH4 220 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 PAGE1O75459 146 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 OR6B1O95007 311 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 CLPTM1O96005 669 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 HLA-DQB2P05538 268 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 HSPA1AP0DMV8 641 aaKnown RBP14.68□□□□□ -0.06
MSH5-201ENST00000375703 HSPA1BP0DMV9 641 aaKnown RBP14.68□□□□□ -0.06
MSH5-201ENST00000375703 CHRNA4P43681 627 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 CPT1AP50416 773 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 ISLR2Q6UXK2 745 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 RANBP10Q6VN20 620 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 PCDH20Q8N6Y1 951 aaKnown RBP14.68□□□□□ -0.06
MSH5-201ENST00000375703 SCAMP5Q8TAC9 235 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 SPPL2BQ8TCT7 592 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 RTP3Q9BQQ7 232 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 CYP4F12Q9HCS2 524 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 NDFIP2Q9NV92 336 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 UTP6Q9NYH9 597 aaKnown RBP14.68□□□□□ -0.06
MSH5-201ENST00000375703 EPS15L1Q9UBC2 864 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 PCDHGB4Q9UN71 923 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 ST3GAL5Q9UNP4 418 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 PCDHGB5Q9Y5G0 923 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 ARL5CA6NH57 179 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 AURKAO14965 403 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 SMIM18P0DKX4 95 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 CPB1P15086 417 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 RPL5P46777 297 aaKnown RBP14.68□□□□□ -0.06
MSH5-201ENST00000375703 SCNN1GP51170 649 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 PSME3P61289 254 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 STX5Q13190 355 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 LSAMPQ13449 338 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 KIAA0930Q6ICG6 404 aaPredicted RBP14.68□□□□□ -0.06
MSH5-201ENST00000375703 PELI3Q8N2H9 469 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 DGCR14Q96DF8 476 aaKnown RBP14.68□□□□□ -0.06
MSH5-201ENST00000375703 MRGPRX2Q96LB1 330 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 PPP1R2P1Q96PQ5 205 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 IGSF5Q9NSI5 407 aa14.68□□□□□ -0.06
MSH5-201ENST00000375703 FGF10O15520 208 aaPredicted RBP14.67□□□□□ -0.06
MSH5-201ENST00000375703 IGLV3-25P01717 112 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 ZNF865P0CJ78 1059 aaPredicted RBP14.67□□□□□ -0.06
MSH5-201ENST00000375703 SULT2A1Q06520 285 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 PDAP1Q13442 181 aaKnown RBP14.67□□□□□ -0.06
MSH5-201ENST00000375703 PCSK7Q16549 785 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 RBM20Q5T481 1227 aaKnown RBP14.67□□□□□ -0.06
MSH5-201ENST00000375703 AGAP9Q5VTM2 703 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 FAM171BQ6P995 826 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 FAR2Q96K12 515 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 FCRL2Q96LA5 508 aaPredicted RBP14.67□□□□□ -0.06
MSH5-201ENST00000375703 NDNQ99608 321 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 ACBD6Q9BR61 282 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 AP5M1Q9H0R1 490 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 EPB41L1Q9H4G0 881 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 EML4Q9HC35 981 aaKnown RBP14.67□□□□□ -0.06
MSH5-201ENST00000375703 SFMBT1Q9UHJ3 866 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 PCDHGA7Q9Y5G6 932 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 IRAK2O43187 625 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 RNASEH2AO75792 299 aaKnown RBP14.67□□□□□ -0.06
MSH5-201ENST00000375703 TFAP2AP05549 437 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 CCR1P32246 355 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 RPL9P32969 192 aaKnown RBP14.67□□□□□ -0.06
MSH5-201ENST00000375703 INHBEP58166 350 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 EIF4EBP2Q13542 120 aaPredicted RBP14.67□□□□□ -0.06
MSH5-201ENST00000375703 UPP1Q16831 310 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 FAM110CQ1W6H9 321 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 SLC5A9Q2M3M2 681 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 PAN2Q504Q3 1202 aaKnown RBP14.67□□□□□ -0.06
MSH5-201ENST00000375703 BRMS1LQ5PSV4 323 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 C6orf52Q5T4I8 152 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 C9orf131Q5VYM1 1079 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 BTBD8Q5XKL5 378 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 TIGD7Q6NT04 549 aaPredicted RBP14.67□□□□□ -0.06
MSH5-201ENST00000375703 METTL23Q86XA0 190 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 SPNS2Q8IVW8 549 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 AFAP1L2Q8N4X5 818 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 NMD3Q96D46 503 aaKnown RBP14.67□□□□□ -0.06
MSH5-201ENST00000375703 CCDC126Q96EE4 140 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 TRIM62Q9BVG3 475 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 PRKD2Q9BZL6 878 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 TRPC7Q9HCX4 862 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 TMLHEQ9NVH6 421 aa14.67□□□□□ -0.06
MSH5-201ENST00000375703 TRIP12Q14669 1992 aaPredicted RBP14.66□□□□□ -0.06
MSH5-201ENST00000375703 M0QZ92 97 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 UBDO15205 165 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 GPC4O75487 556 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 IPO13O94829 963 aaKnown RBP14.66□□□□□ -0.06
MSH5-201ENST00000375703 ODC1P11926 461 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 KCNA5P22460 613 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 HSPA13P48723 471 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 TRIM25Q14258 630 aaKnown RBP14.66□□□□□ -0.06
MSH5-201ENST00000375703 EML3Q32P44 896 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 ZNF789Q5FWF6 425 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 TECRLQ5HYJ1 363 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 IL23RQ5VWK5 629 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 KLC3Q6P597 504 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 IYDQ6PHW0 289 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 CHSY3Q70JA7 882 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 RPS27LQ71UM5 84 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms