RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 KIF5AQ12840 1032 aa16.15■□□□□ 0.18
C11orf88-202ENST00000375618 GRIK2Q13002 908 aa16.15■□□□□ 0.18
C11orf88-202ENST00000375618 TMEM259Q4ZIN3 620 aa16.15■□□□□ 0.18
C11orf88-202ENST00000375618 STPG1Q5TH74 334 aa16.15■□□□□ 0.18
C11orf88-202ENST00000375618 KAZNQ674X7 775 aa16.15■□□□□ 0.18
C11orf88-202ENST00000375618 CEP76Q8TAP6 659 aa16.15■□□□□ 0.18
C11orf88-202ENST00000375618 HDAC11Q96DB2 347 aa16.15■□□□□ 0.18
C11orf88-202ENST00000375618 OLFM3Q96PB7 478 aa16.15■□□□□ 0.18
C11orf88-202ENST00000375618 NUSAP1Q9BXS6 441 aaKnown RBP16.15■□□□□ 0.18
C11orf88-202ENST00000375618 SUV39H2Q9H5I1 410 aa16.15■□□□□ 0.18
C11orf88-202ENST00000375618 SUSD2Q9UGT4 822 aa16.15■□□□□ 0.18
C11orf88-202ENST00000375618 PACSIN2Q9UNF0 486 aaPredicted RBP16.15■□□□□ 0.18
C11orf88-202ENST00000375618 PCDHA3Q9Y5H8 950 aa16.15■□□□□ 0.18
C11orf88-202ENST00000375618 A0A1W2PR77 199 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 TRAFD1O14545 582 aaPredicted RBP16.14■□□□□ 0.17
C11orf88-202ENST00000375618 MATN3O15232 486 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 ARHGAP6O43182 974 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 FTCDO95954 541 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 GNSP15586 552 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 CTNNA2P26232 953 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 PI4KAP42356 2102 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 SEMG2Q02383 582 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 ZNF235Q14590 738 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 IFI16Q16666 785 aaKnown RBP16.14■□□□□ 0.17
C11orf88-202ENST00000375618 MARC1Q5VT66 337 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 KDM7AQ6ZMT4 941 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 HORMAD1Q86X24 394 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 EXD1Q8NHP7 514 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 KIAA1524Q8TCG1 905 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 NETO1Q8TDF5 533 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.14■□□□□ 0.17
C11orf88-202ENST00000375618 ECHDC3Q96DC8 303 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 TUBGCP5Q96RT8 1024 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 MYOCQ99972 504 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 IL21RQ9HBE5 538 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 NOD2Q9HC29 1040 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 NT5MQ9NPB1 228 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 FZD3Q9NPG1 666 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 DLL3Q9NYJ7 618 aa16.14■□□□□ 0.17
C11orf88-202ENST00000375618 C4orf47A7E2U8 309 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 PRR5-ARHGAP8B1AHC4 643 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 KCNK1O00180 336 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 ARHGAP33O14559 1287 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 TM4SF5O14894 197 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 RAD51BO15315 384 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 SLC31A1O15431 190 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 AP1G1O43747 822 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 CST8O60676 142 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 PCDH8O95206 1070 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 ZRANB2O95218 330 aaKnown RBP eCLIP16.13■□□□□ 0.17
C11orf88-202ENST00000375618 HLA-DQB2P05538 268 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 CCNCP24863 283 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 RENBPP51606 427 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 LIMK1P53667 647 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 ARHGAP8P85298 464 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 RAD51Q06609 339 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 PPIDQ08752 370 aaKnown RBP16.13■□□□□ 0.17
C11orf88-202ENST00000375618 TRAF2Q12933 501 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 ZBTB17Q13105 803 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 HNRNPDQ14103 355 aaKnown RBP16.13■□□□□ 0.17
C11orf88-202ENST00000375618 KIF19Q2TAC6 998 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 TFDP3Q5H9I0 405 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 TTC7BQ86TV6 843 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 LRRC49Q8IUZ0 686 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 CCDC13Q8IYE1 715 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 RCOR2Q8IZ40 523 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 CNTD1Q8N815 330 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 CCDC112Q8NEF3 446 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 FATE1Q969F0 183 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 SERAC1Q96JX3 654 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 CALR3Q96L12 384 aaKnown RBP16.13■□□□□ 0.17
C11orf88-202ENST00000375618 ZNF641Q96N77 438 aaPredicted RBP16.13■□□□□ 0.17
C11orf88-202ENST00000375618 NUDCD1Q96RS6 583 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 GTPBP2Q9BX10 602 aaKnown RBP16.13■□□□□ 0.17
C11orf88-202ENST00000375618 HEMGNQ9BXL5 484 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 MAK16Q9BXY0 300 aaKnown RBP16.13■□□□□ 0.17
C11orf88-202ENST00000375618 PCDHGC4Q9Y5F7 938 aa16.13■□□□□ 0.17
C11orf88-202ENST00000375618 ANKRD36A6QL64 1941 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 KCNK3O14649 394 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 SLC30A4O14863 429 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 DDX3YO15523 660 aaKnown RBP16.12■□□□□ 0.17
C11orf88-202ENST00000375618 FOXD2O60548 495 aaPredicted RBP16.12■□□□□ 0.17
C11orf88-202ENST00000375618 PYGMP11217 842 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 CCNB1P14635 433 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 MX2P20592 715 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 AP1S1P61966 158 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 RACK1P63244 317 aaKnown RBP16.12■□□□□ 0.17
C11orf88-202ENST00000375618 DSC2Q02487 901 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 NIPAL4Q0D2K0 466 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 PTPRRQ15256 657 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 NEK5Q6P3R8 708 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 RABEPKQ7Z6M1 372 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 PRPF39Q86UA1 669 aaKnown RBP16.12■□□□□ 0.17
C11orf88-202ENST00000375618 MINDY1Q8N5J2 469 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.12■□□□□ 0.17
C11orf88-202ENST00000375618 TMEM145Q8NBT3 493 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 CCNYQ8ND76 341 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 ARRDC2Q8TBH0 407 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 RAB7BQ96AH8 199 aa16.12■□□□□ 0.17
C11orf88-202ENST00000375618 HAUS1Q96CS2 278 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms