RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 RDH11Q8TC12 318 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 CALML6Q8TD86 181 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 OVCA2Q8WZ82 227 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 VPS39Q96JC1 886 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 AGAP2Q99490 1192 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 GPR22Q99680 433 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 NDFIP2Q9NV92 336 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 EMCNQ9ULC0 261 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 COMMD3-BMI1R4GMX3 469 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 HEATR9A2RTY3 570 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 MT-CYBP00156 380 aaPredicted RBP8.3□□□□□ -1.08
UBR4-202ENST00000375224 KRT16P08779 473 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 ZDHHC11BP0C7U3 371 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 SERPINB3P29508 390 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 SLC1A6P48664 564 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 IRX4P78413 519 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 IL10RBQ08334 325 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 PSMD5Q16401 504 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 KIAA0930Q6ICG6 404 aaPredicted RBP8.3□□□□□ -1.08
UBR4-202ENST00000375224 KIF2BQ8N4N8 673 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 PIWIL2Q8TC59 973 aaKnown RBP8.3□□□□□ -1.08
UBR4-202ENST00000375224 NACC2Q96BF6 587 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 RANBP9Q96S59 729 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 TTLL2Q9BWV7 592 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 SSX2IPQ9Y2D8 614 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 SLC27A5Q9Y2P5 690 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 RAMP2O60895 175 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 SIN3BO75182 1162 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 PMPCBO75439 489 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 WFS1O76024 890 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 T-ENOLP0DO92 83 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 RALBP11234 206 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 FGF3P11487 239 aaPredicted RBP8.29□□□□□ -1.08
UBR4-202ENST00000375224 SEPT6Q14141 434 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 PCLAFQ15004 111 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 DENND5AQ6IQ26 1287 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 FBXL22Q6P050 247 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 RNF19BQ6ZMZ0 732 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 KIAA0408Q6ZU52 694 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 ZNF354CQ86Y25 554 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 MIB1Q86YT6 1006 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.29□□□□□ -1.08
UBR4-202ENST00000375224 IMP4Q96G21 291 aaKnown RBP8.29□□□□□ -1.08
UBR4-202ENST00000375224 MRGPRX2Q96LB1 330 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 RPRD1AQ96P16 312 aaPredicted RBP8.29□□□□□ -1.08
UBR4-202ENST00000375224 MCMBPQ9BTE3 642 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 NOL6Q9H6R4 1146 aaKnown RBP8.29□□□□□ -1.08
UBR4-202ENST00000375224 IL1RAPL1Q9NZN1 696 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 TMEM216Q9P0N5 145 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 MAGED2Q9UNF1 606 aaPredicted RBP8.29□□□□□ -1.08
UBR4-202ENST00000375224 NYNRINQ9P2P1 1898 aaKnown RBP8.29□□□□□ -1.08
UBR4-202ENST00000375224 SLC38A8A6NNN8 435 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 TMEM114B3SHH9 223 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 GSRP00390 522 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 CXCL10P02778 98 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 C2P06681 752 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 ALDH7A1P49419 539 aaKnown RBP8.29□□□□□ -1.08
UBR4-202ENST00000375224 KPNA2P52292 529 aaKnown RBP8.29□□□□□ -1.08
UBR4-202ENST00000375224 WNT3AP56704 352 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 ITKQ08881 620 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 DUSP4Q13115 394 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 POU6F1Q14863 301 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 GPNMBQ14956 572 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 POLD3Q15054 466 aaPredicted RBP8.29□□□□□ -1.08
UBR4-202ENST00000375224 CTC1Q2NKJ3 1217 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 USP41Q3LFD5 358 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.29□□□□□ -1.08
UBR4-202ENST00000375224 PPM1JQ5JR12 505 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 RAP1GAP2Q684P5 730 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 RAPH1Q70E73 1250 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 CLEC14AQ86T13 490 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 ZC3HC1Q86WB0 502 aaKnown RBP8.29□□□□□ -1.08
UBR4-202ENST00000375224 BBS5Q8N3I7 341 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 TEX26Q8N6G2 289 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 HMCESQ96FZ2 354 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 CCDC68Q9H2F9 335 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 NT5MQ9NPB1 228 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 DNMT3LQ9UJW3 386 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 BACE2Q9Y5Z0 518 aa8.29□□□□□ -1.08
UBR4-202ENST00000375224 F5H5T6 163 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 FCHO1O14526 889 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 TLR5O60602 858 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 PAPSS2O95340 614 aaPredicted RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 ESRRAP11474 423 aaPredicted RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 MYL4P12829 197 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 CRABP2P29373 138 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 ATP5C1P36542 298 aaKnown RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 GATMP50440 423 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 SERPINH1P50454 418 aaKnown RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 APLP1P51693 650 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 AQP5P55064 265 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 TBL3Q12788 808 aaKnown RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 ASPHQ12797 758 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 SLC12A1Q13621 1099 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 RCN2Q14257 317 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 USP10Q14694 798 aaKnown RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 RTP2Q5QGT7 225 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 KDELC1Q6UW63 502 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 TFAP2DQ7Z6R9 452 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 CMC1Q7Z7K0 106 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms