RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 THEGQ9P2T0 379 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 THAP10Q9P2Z0 257 aaPredicted RBP17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 HCN2Q9UL51 889 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 DUSP12Q9UNI6 340 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 SLC8A2Q9UPR5 921 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 RAI2Q9Y5P3 530 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 UNC80Q8N2C7 3258 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 TBC1D3BA6NDS4 549 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 TTC34A8MYJ7 566 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 FZD6O60353 706 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 BANF1O75531 89 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 AGTP01019 485 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 ABHD2P08910 425 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 HNRNPLP14866 589 aaKnown RBP eCLIP17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 GALK1P51570 392 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 CCNHP51946 323 aaPredicted RBP17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 ST8SIA6P61647 398 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 ZNF234Q14588 700 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 GRM3Q14832 879 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 SLC1A5Q15758 541 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 PCSK7Q16549 785 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 HNRNPA1L2Q32P51 320 aaKnown RBP17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 TMEM196Q5HYL7 178 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 ZBED8Q8IZ13 594 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 EZH1Q92800 747 aaPredicted RBP17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 APOL2Q9BQE5 337 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 CPEB1Q9BZB8 566 aaKnown RBP17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 IL22Q9GZX6 179 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 EVLQ9UI08 416 aaPredicted RBP17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 PLA2G4CQ9UP65 541 aa17.39■□□□□ 0.37
HLA-DMA-201ENST00000374843 C19orf67A6NJJ6 358 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 SDR42E2A6NKP2 422 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 TRAFD1O14545 582 aaPredicted RBP17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 RIPK2O43353 540 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 NARSO43776 548 aaKnown RBP17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 POP4O95707 220 aaKnown RBP17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 TTC4O95801 387 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 PRLP01236 227 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 MGAT1P26572 445 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 HSD17B3P37058 310 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 ELK3P41970 407 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 NPY2RP49146 381 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 RPL26P61254 145 aaKnown RBP17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 MSLNQ13421 630 aaPredicted RBP17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 CASP8Q14790 479 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 MYLK3Q32MK0 819 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 SIRPB2Q5JXA9 342 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 STEAP4Q687X5 459 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 DPY19L3Q6ZPD9 716 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 FBXO36Q8NEA4 188 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 KCNV2Q8TDN2 545 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 PTCD2Q8WV60 388 aaKnown RBP17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 ECHDC3Q96DC8 303 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 IFT43Q96FT9 208 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 NAT9Q9BTE0 207 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 FUT8Q9BYC5 575 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 SEMA4AQ9H3S1 761 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 ATP13A3Q9H7F0 1226 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 FBRSL1Q9HCM7 1045 aaKnown RBP17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 HEBP1Q9NRV9 189 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 ZNF446Q9NWS9 450 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 SYBUQ9NX95 663 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 BFARQ9NZS9 450 aa17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 RPL26L1Q9UNX3 145 aaKnown RBP17.38■□□□□ 0.37
HLA-DMA-201ENST00000374843 EDDM13A0A1B0GTR0 161 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 SHISA7A6NL88 538 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 K7EQS6 105 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 PGLSO95336 258 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 CPP00450 1065 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 ALADP13716 330 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 DRD1P21728 446 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 SERPINA4P29622 427 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 CHRNA4P43681 627 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 SESN2P58004 480 aaPredicted RBP17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 MTM1Q13496 603 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 ACCSLQ4AC99 568 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 FNDC3BQ53EP0 1204 aaKnown RBP17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 EGFLAMQ63HQ2 1017 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 CCNJLQ8IV13 435 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 IGDCC3Q8IVU1 814 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 MPP5Q8N3R9 675 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 DNAAF3Q8N9W5 541 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 OR6K2Q8NGY2 324 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 PYROXD1Q8WU10 500 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 PTPRN2Q92932 1015 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 STAMBPL1Q96FJ0 436 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 LRIG1Q96JA1 1093 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 C9orf72Q96LT7 481 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 ZNF641Q96N77 438 aaPredicted RBP17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 RANBP9Q96S59 729 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 EBNA1BP2Q99848 306 aaKnown RBP17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 VIPAS39Q9H9C1 493 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 PLAC1Q9HBJ0 212 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 MRM3Q9HC36 420 aaKnown RBP17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 CHMP2BQ9UQN3 213 aa17.37■□□□□ 0.37
HLA-DMA-201ENST00000374843 A0A1W2PQ67 120 aa17.36■□□□□ 0.37
HLA-DMA-201ENST00000374843 TSPAN11A1L157 253 aa17.36■□□□□ 0.37
HLA-DMA-201ENST00000374843 MAP2K7O14733 419 aa17.36■□□□□ 0.37
HLA-DMA-201ENST00000374843 SPAG6O75602 509 aa17.36■□□□□ 0.37
HLA-DMA-201ENST00000374843 GSTA2P09210 222 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms