RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 NECAB1Q8N987 351 aa4.89□□□□□ -1.63
PMS1-202ENST00000374826 DEFB118Q96PH6 123 aa4.89□□□□□ -1.63
PMS1-202ENST00000374826 LZTS2Q9BRK4 669 aa4.89□□□□□ -1.63
PMS1-202ENST00000374826 CINPQ9BW66 212 aaPredicted RBP4.89□□□□□ -1.63
PMS1-202ENST00000374826 SLC26A6Q9BXS9 759 aa4.89□□□□□ -1.63
PMS1-202ENST00000374826 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.89□□□□□ -1.63
PMS1-202ENST00000374826 ZHX1Q9UKY1 873 aaPredicted RBP4.89□□□□□ -1.63
PMS1-202ENST00000374826 MRPL11Q9Y3B7 192 aaKnown RBP4.89□□□□□ -1.63
PMS1-202ENST00000374826 A0A087WZ62 844 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 LY6G6EA0A0G2JKS1 128 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 CCDC196A0A1B0GTZ2 297 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 KPNA5O15131 536 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 PRAMEF2O60811 474 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 SNAI1O95863 264 aaPredicted RBP4.88□□□□□ -1.63
PMS1-202ENST00000374826 HOXD9P28356 352 aaPredicted RBP4.88□□□□□ -1.63
PMS1-202ENST00000374826 TACR3P29371 465 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 PIK3CBP42338 1070 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 HSD17B4P51659 736 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 EVCP57679 992 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 AKAP17AQ02040 695 aaKnown RBP4.88□□□□□ -1.63
PMS1-202ENST00000374826 ST3GAL1Q11201 340 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 MTAPQ13126 283 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 FHL3Q13643 280 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 ACOX1Q15067 660 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 ANKRD1Q15327 319 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 UBE2SQ16763 222 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 MAP3K21Q5TCX8 1036 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 KIAA1161Q6NSJ0 714 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 CCDC83Q8IWF9 413 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 ATP11CQ8NB49 1132 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 SUN3Q8TAQ9 357 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 GTF3C6Q969F1 213 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 LRRC46Q96FV0 321 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 ZNF274Q96GC6 653 aaPredicted RBP4.88□□□□□ -1.63
PMS1-202ENST00000374826 TAAR1Q96RJ0 339 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 VPS45Q9NRW7 570 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 VPS54Q9P1Q0 977 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 PNMA2Q9UL42 364 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 CNPY2Q9Y2B0 182 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 KIAA1671Q9BY89 1806 aa4.88□□□□□ -1.63
PMS1-202ENST00000374826 CITO14578 2027 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.87□□□□□ -1.63
PMS1-202ENST00000374826 FAM90A10PA6NDY2 464 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 POM121BA6NF01 834 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 ASB14A6NK59 587 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 CLCA1A8K7I4 914 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 JAK2O60674 1132 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 PFKFB2O60825 505 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 CTDNEP1O95476 244 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 POLR2MP0CAP2 368 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 TMIGD3P0DMS9 266 aaPredicted RBP4.87□□□□□ -1.63
PMS1-202ENST00000374826 SCG2P13521 617 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 PRF1P14222 555 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 IFNAR1P17181 557 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 THBS4P35443 961 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 JAK3P52333 1124 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 ID2Q02363 134 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 CFHR1Q03591 330 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 ZNF91Q05481 1191 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 TRAF1Q13077 416 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 GPS1Q13098 491 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 DNASE1L3Q13609 305 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 KPNB1Q14974 876 aaKnown RBP4.87□□□□□ -1.63
PMS1-202ENST00000374826 PFKFB3Q16875 520 aaPredicted RBP4.87□□□□□ -1.63
PMS1-202ENST00000374826 TRIM71Q2Q1W2 868 aaKnown RBP4.87□□□□□ -1.63
PMS1-202ENST00000374826 C10orf25Q5T742 122 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 KLHDC7AQ5VTJ3 777 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 ARHGEF16Q5VV41 709 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 CPLX2Q6PUV4 134 aaKnown RBP4.87□□□□□ -1.63
PMS1-202ENST00000374826 USP17L6PQ6QN14 398 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 CRTC1Q6UUV9 634 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 CCDC33Q8N5R6 958 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 U2AF1L4Q8WU68 220 aaKnown RBP4.87□□□□□ -1.63
PMS1-202ENST00000374826 SIGLEC11Q96RL6 698 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 RMDN3Q96TC7 470 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 RNF26Q9BY78 433 aaPredicted RBP4.87□□□□□ -1.63
PMS1-202ENST00000374826 ALDH8A1Q9H2A2 487 aaPredicted RBP4.87□□□□□ -1.63
PMS1-202ENST00000374826 SAP30LQ9HAJ7 183 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 ZBTB26Q9HCK0 441 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 PXMP2Q9NR77 195 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 ADD3Q9UEY8 706 aaKnown RBP4.87□□□□□ -1.63
PMS1-202ENST00000374826 FAM50BQ9Y247 325 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 STK36Q9NRP7 1315 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 TDRD15B5MCY1 1934 aaKnown RBP4.87□□□□□ -1.63
PMS1-202ENST00000374826 ATG2AQ2TAZ0 1938 aa4.87□□□□□ -1.63
PMS1-202ENST00000374826 ANK1P16157 1881 aa4.86□□□□□ -1.63
PMS1-202ENST00000374826 SMCO2A6NFE2 343 aa4.86□□□□□ -1.63
PMS1-202ENST00000374826 MEIS2O14770 477 aa4.86□□□□□ -1.63
PMS1-202ENST00000374826 AREL1O15033 823 aa4.86□□□□□ -1.63
PMS1-202ENST00000374826 SEPT4O43236 478 aa4.86□□□□□ -1.63
PMS1-202ENST00000374826 CCNT2O60583 730 aaKnown RBP4.86□□□□□ -1.63
PMS1-202ENST00000374826 SGPL1O95470 568 aa4.86□□□□□ -1.63
PMS1-202ENST00000374826 PGK1P00558 417 aa4.86□□□□□ -1.63
PMS1-202ENST00000374826 MBPP02686 304 aaPredicted RBP4.86□□□□□ -1.63
PMS1-202ENST00000374826 TFRCP02786 760 aaKnown RBP4.86□□□□□ -1.63
PMS1-202ENST00000374826 ALPLP05186 524 aa4.86□□□□□ -1.63
PMS1-202ENST00000374826 ARP10275 920 aa4.86□□□□□ -1.63
PMS1-202ENST00000374826 MYL4P12829 197 aa4.86□□□□□ -1.63
PMS1-202ENST00000374826 AKR1A1P14550 325 aa4.86□□□□□ -1.63
PMS1-202ENST00000374826 TSHRP16473 764 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms