RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ALG9Q9H6U8 611 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 SP110Q9HB58 689 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 GIMAP2Q9UG22 337 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 TSR3Q9UJK0 312 aaKnown RBP17.21■□□□□ 0.35
RXRB-201ENST00000374680 GLDCP23378 1020 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 KCNC1P48547 511 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 MS4A2Q01362 244 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 CDK18Q07002 472 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 GPR158Q5T848 1215 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 RASAL3Q86YV0 1011 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 GALNT4Q8N4A0 578 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 IGSF8Q969P0 613 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 EXOC2Q96KP1 924 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 CCDC167Q9P0B6 97 aa17.21■□□□□ 0.35
RXRB-201ENST00000374680 MARCH4Q9P2E8 410 aaPredicted RBP17.21■□□□□ 0.35
RXRB-201ENST00000374680 KCNU1A8MYU2 1149 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 ALOX15P16050 662 aaPredicted RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 HOXC8P31273 242 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 ACVRL1P37023 503 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 DPP6P42658 865 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 GATMP50440 423 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 MLLT6P55198 1093 aaPredicted RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 PRKAA1Q13131 559 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 GALNT3Q14435 633 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 PGM2L1Q6PCE3 622 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 IFNL1Q8IU54 200 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 KYQ8NBH2 561 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 ISL2Q96A47 359 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 ANKRD27Q96NW4 1050 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 GPR78Q96P69 363 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 TSPAN18Q96SJ8 248 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 COPS7BQ9H9Q2 264 aaPredicted RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 UXTQ9UBK9 157 aaPredicted RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 RAD54BQ9Y620 910 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 RGSL1A5PLK6 1076 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 LRRC14BA6NHZ5 514 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 PPP6CO00743 305 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 TNFRSF10BO14763 440 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 CCNT2O60583 730 aaKnown RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 TRPA1O75762 1119 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 LYNP07948 512 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 TBX4P57082 545 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 PRAMEP78395 509 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 TMCO4Q5TGY1 634 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 MARC1Q5VT66 337 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 RANBP10Q6VN20 620 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 GIPC2Q8TF65 315 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 NAT14Q8WUY8 206 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 TBATAQ96M53 351 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 RPRD1AQ96P16 312 aaPredicted RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 SEPT5Q99719 369 aaPredicted RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 STN1Q9H668 368 aaKnown RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 PTGDR2Q9Y5Y4 395 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 COPG1Q9Y678 874 aaKnown RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 PRRC2BQ5JSZ5 2229 aaKnown RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 TMEM114B3SHH9 223 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 KIF1CO43896 1103 aaKnown RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 FKBP6O75344 327 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 THRAP10827 490 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 DBN1Q16643 649 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 GEN1Q17RS7 908 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 C10orf120Q5SQS8 335 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 RTN4RL1Q86UN2 441 aaPredicted RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 RTL3Q8N8U3 475 aaKnown RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 OR9I1Q8NGQ6 314 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 IRGQQ8WZA9 623 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 MRPL46Q9H2W6 279 aaKnown RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 IL1RL2Q9HB29 575 aa17.2■□□□□ 0.34
RXRB-201ENST00000374680 FBRSL1Q9HCM7 1045 aaKnown RBP17.2■□□□□ 0.34
RXRB-201ENST00000374680 SUPT7LO94864 414 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 CAP1Q01518 475 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 PRKCZQ05513 592 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 FLOT2Q14254 428 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 PITRM1Q5JRX3 1037 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 HAPLN3Q96S86 360 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 PKMYT1Q99640 499 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 MCMBPQ9BTE3 642 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 ENTPD7Q9NQZ7 604 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 GMPR2Q9P2T1 348 aaKnown RBP17.19■□□□□ 0.34
RXRB-201ENST00000374680 TSC2P49815 1807 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 SLC12A8A0AV02 714 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 TADA2AO75478 443 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 FKBP1BP68106 108 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 MGAT3Q09327 533 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 CEACAM7Q14002 265 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 UGP2Q16851 508 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 MGAT5BQ3V5L5 792 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 FOXB2Q5VYV0 432 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 SPATA24Q86W54 205 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 KDM1BQ8NB78 822 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 ZCWPW1Q9H0M4 648 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 PCDHAC1Q9H158 963 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 FAM96AQ9H5X1 160 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 ARL5AQ9Y689 179 aa17.19■□□□□ 0.34
RXRB-201ENST00000374680 MYOCOSA0A1B0GUC4 107 aa17.18■□□□□ 0.34
RXRB-201ENST00000374680 IGLV3-25P01717 112 aa17.18■□□□□ 0.34
RXRB-201ENST00000374680 MYL4P12829 197 aa17.18■□□□□ 0.34
RXRB-201ENST00000374680 YWHAQP27348 245 aa17.18■□□□□ 0.34
RXRB-201ENST00000374680 ADRA1AP35348 466 aa17.18■□□□□ 0.34
RXRB-201ENST00000374680 SERPINH1P50454 418 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms