RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 CSRP3P50461 194 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 PLK1P53350 603 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 NRG1Q02297 640 aaPredicted RBP16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 ZYG11AQ6WRX3 759 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 ULK2Q8IYT8 1036 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 C2CD4AQ8NCU7 369 aaPredicted RBP16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 BLOC1S5Q8TDH9 187 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 HEXDCQ8WVB3 486 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 N4BP2L2Q92802 583 aaPredicted RBP16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 MARK4Q96L34 752 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 PPP1R12CQ9BZL4 782 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 NACA2Q9H009 215 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 DNAJC28Q9NX36 388 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 NSMCE4AQ9NXX6 385 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 MARCH4Q9P2E8 410 aaPredicted RBP16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 ZNF212Q9UDV6 495 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 ZDHHC2Q9UIJ5 367 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 PLA2G4CQ9UP65 541 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 PLXNA3P51805 1871 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 GREB1Q4ZG55 1949 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 SLC4A1P02730 911 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 PAMP19021 973 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 GLDCP23378 1020 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 SLC6A4P31645 630 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 SLC12A2P55011 1212 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 CDK18Q07002 472 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 UGP2Q16851 508 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 TRIM68Q6AZZ1 485 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 TMC7Q7Z402 723 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 TMCO2Q7Z6W1 182 aaPredicted RBP16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 SCUBE1Q8IWY4 988 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 OR7D4Q8NG98 312 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 HDAC10Q969S8 669 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 GPR78Q96P69 363 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 SMIM14Q96QK8 99 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 CLIC5Q9NZA1 410 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 IL37Q9NZH6 218 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 CRYL1Q9Y2S2 319 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 WASF2Q9Y6W5 498 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 FAM92AA1XBS5 289 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 ARSAP15289 507 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 AOC1P19801 751 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 DNAJB2P25686 324 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 SERPINB5P36952 375 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 RPS24P62847 133 aaKnown RBP16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 CCDC6Q16204 474 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 PDCD2Q16342 344 aaPredicted RBP16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 TSTD2Q5T7W7 516 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 LIPMQ5VYY2 423 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 KIAA0930Q6ICG6 404 aaPredicted RBP16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 TLDC1Q6P9B6 456 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 GIMAP7Q8NHV1 300 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 ARRDC2Q8TBH0 407 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 ZNF512Q96ME7 567 aaPredicted RBP16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 SPON2Q9BUD6 331 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 UBE2OQ9C0C9 1292 aaKnown RBP16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 SLC7A8Q9UHI5 535 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 PACSIN3Q9UKS6 424 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 ARL5AQ9Y689 179 aa16.12■□□□□ 0.17
CNKSR1-202ENST00000374253 IGLV3-10A0A075B6K4 115 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 HEATR9A2RTY3 570 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 SLC38A8A6NNN8 435 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 KIF3CO14782 793 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 PDE5AO76074 875 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 RTN3O95197 1032 aaPredicted RBP16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 HNRNPLP14866 589 aaKnown RBP eCLIP16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 TACR2P21452 398 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 OR1D2P34982 312 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 EPHB1P54762 984 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 LBRQ14739 615 aaKnown RBP16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 TMEM198Q66K66 360 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 IL31Q6EBC2 164 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 EPGNQ6UW88 154 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 FAM126BQ8IXS8 530 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 STYXQ8WUJ0 223 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 CCDC124Q96CT7 223 aaKnown RBP16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 PANX3Q96QZ0 392 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 TSEN34Q9BSV6 310 aaKnown RBP16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 TTPALQ9BTX7 342 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 ILKAPQ9H0C8 392 aaPredicted RBP16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 GKN1Q9NS71 199 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 PRSS56P0CW18 603 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 IRF1P10914 325 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 KCNA5P22460 613 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 CPOXP36551 454 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 SERINC3Q13530 473 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 TAF11Q15544 211 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 PIM3Q86V86 326 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 TXNDC5Q8NBS9 432 aaKnown RBP16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 FBXO22Q8NEZ5 403 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 CFAP61Q8NHU2 1237 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 SPPL2BQ8TCT7 592 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 SREK1Q8WXA9 508 aaKnown RBP16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 HHIPL1Q96JK4 782 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 DCLRE1BQ9H816 532 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 ANKRD6Q9Y2G4 727 aa16.11■□□□□ 0.17
CNKSR1-202ENST00000374253 TBX10O75333 385 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 PSMG1O95456 288 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 ALOX15P16050 662 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms