RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 DENND6AQ8IWF6 608 aa25.22■■□□□ 1.63
CTSA-203ENST00000372459 C2CD4AQ8NCU7 369 aaPredicted RBP25.22■■□□□ 1.63
CTSA-203ENST00000372459 KREMEN2Q8NCW0 462 aa25.22■■□□□ 1.63
CTSA-203ENST00000372459 CALML6Q8TD86 181 aa25.22■■□□□ 1.63
CTSA-203ENST00000372459 RAD9AQ99638 391 aa25.22■■□□□ 1.63
CTSA-203ENST00000372459 LSM7Q9UK45 103 aaKnown RBP25.22■■□□□ 1.63
CTSA-203ENST00000372459 SLC39A10Q9ULF5 831 aa25.22■■□□□ 1.63
CTSA-203ENST00000372459 MROH6A6NGR9 719 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 PROCP04070 461 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 GABRB3P28472 473 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 SLC1A2P43004 574 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 ZXDBP98169 803 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 CCDC15Q0P6D6 951 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 BST1Q10588 318 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 FASTKD1Q53R41 847 aaKnown RBP25.21■■□□□ 1.63
CTSA-203ENST00000372459 NEPROQ6NW34 567 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 PARP9Q8IXQ6 854 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 HS6ST3Q8IZP7 471 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 CARNMT1Q8N4J0 409 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 C7orf26Q96N11 449 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 TCF25Q9BQ70 676 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 LRRC3Q9BY71 257 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 TMEM216Q9P0N5 145 aa25.21■■□□□ 1.63
CTSA-203ENST00000372459 GSRP00390 522 aa25.2■■□□□ 1.63
CTSA-203ENST00000372459 C2P06681 752 aa25.2■■□□□ 1.63
CTSA-203ENST00000372459 MPP1Q00013 466 aa25.2■■□□□ 1.63
CTSA-203ENST00000372459 TMEM240Q5SV17 173 aa25.2■■□□□ 1.63
CTSA-203ENST00000372459 ZNF470Q6ECI4 717 aa25.2■■□□□ 1.63
CTSA-203ENST00000372459 PSRC1Q6PGN9 363 aaPredicted RBP25.2■■□□□ 1.63
CTSA-203ENST00000372459 KIAA0408Q6ZU52 694 aa25.2■■□□□ 1.63
CTSA-203ENST00000372459 FITM2Q8N6M3 262 aa25.2■■□□□ 1.63
CTSA-203ENST00000372459 MAB21L3Q8N8X9 362 aa25.2■■□□□ 1.63
CTSA-203ENST00000372459 TMA16Q96EY4 203 aaKnown RBP25.2■■□□□ 1.63
CTSA-203ENST00000372459 GCNAQ96QF7 691 aa25.2■■□□□ 1.63
CTSA-203ENST00000372459 IRAK3Q9Y616 596 aa25.2■■□□□ 1.63
CTSA-203ENST00000372459 CCDC195A0A1B0GUA6 201 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 DCTN3O75935 186 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 UBOX5O94941 541 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 CKMP06732 381 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 CES1P23141 567 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 CDC25CP30307 473 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 USP10Q14694 798 aaKnown RBP25.2■■□□□ 1.62
CTSA-203ENST00000372459 SETDB1Q15047 1291 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 DLG2Q15700 870 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 SNCBQ16143 134 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 CLEC14AQ86T13 490 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 FAM217AQ8IXS0 508 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 OR13J1Q8NGT2 312 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 SP7Q8TDD2 431 aaPredicted RBP25.2■■□□□ 1.62
CTSA-203ENST00000372459 TLK1Q9UKI8 766 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 FBXO5Q9UKT4 447 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 LZTS1Q9Y250 596 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 ANKRD6Q9Y2G4 727 aa25.2■■□□□ 1.62
CTSA-203ENST00000372459 SCAMP3O14828 347 aaKnown RBP25.19■■□□□ 1.62
CTSA-203ENST00000372459 INSIG1O15503 277 aa25.19■■□□□ 1.62
CTSA-203ENST00000372459 SLC7A9P82251 487 aa25.19■■□□□ 1.62
CTSA-203ENST00000372459 RAPH1Q70E73 1250 aa25.19■■□□□ 1.62
CTSA-203ENST00000372459 ACVR1CQ8NER5 493 aa25.19■■□□□ 1.62
CTSA-203ENST00000372459 PPP1R14CQ8TAE6 165 aa25.19■■□□□ 1.62
CTSA-203ENST00000372459 MAGEC3Q8TD91 643 aa25.19■■□□□ 1.62
CTSA-203ENST00000372459 NOD2Q9HC29 1040 aa25.19■■□□□ 1.62
CTSA-203ENST00000372459 ZNF510Q9Y2H8 683 aa25.19■■□□□ 1.62
CTSA-203ENST00000372459 E2F8A0AVK6 867 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 CFAP73A6NFT4 308 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 GFRA2O00451 464 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 LUC7L3O95232 432 aaKnown RBP25.18■■□□□ 1.62
CTSA-203ENST00000372459 NDST3O95803 873 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 GLUD1P00367 558 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 PRKCGP05129 697 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 CR2P20023 1033 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 CD151P48509 253 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 CSRP3P50461 194 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 SCNN1BP51168 640 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 CYTH1Q15438 398 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 GALNTL6Q49A17 601 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 UBE2Q1Q7Z7E8 422 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 PLD6Q8N2A8 252 aaKnown RBP25.18■■□□□ 1.62
CTSA-203ENST00000372459 SCUBE2Q9NQ36 999 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 TRAV19A0A0A6YYK7 116 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 SLC7A4O43246 635 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 CTNNB1P35222 781 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 RGRP47804 291 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 ERVFC1P60507 584 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 ARF5P84085 180 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 OCRLQ01968 901 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 STX3Q13277 289 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 GALNT3Q14435 633 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 TAF1BQ53T94 588 aaPredicted RBP25.18■■□□□ 1.62
CTSA-203ENST00000372459 RFWD2Q8NHY2 731 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 PEX13Q92968 403 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 ZNF358Q9NW07 568 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.18■■□□□ 1.624e-7■□□□□ 10.1
CTSA-203ENST00000372459 COPG2Q9UBF2 871 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 DCTN4Q9UJW0 460 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 SH3BP1Q9Y3L3 701 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 SLC4A7Q9Y6M7 1214 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 DENND4CQ5VZ89 1909 aa25.18■■□□□ 1.62
CTSA-203ENST00000372459 LDB2O43679 373 aa25.17■■□□□ 1.62
CTSA-203ENST00000372459 TLL1O43897 1013 aa25.17■■□□□ 1.62
CTSA-203ENST00000372459 MGRN1O60291 552 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms