RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ATG7O95352 703 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 HGFP14210 728 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 XIAPP98170 497 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 C1DQ13901 141 aaKnown RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 SLC10A6Q3KNW5 377 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 USP41Q3LFD5 358 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 PAGE2BQ5JRK9 111 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 LYPLAL1Q5VWZ2 237 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 ARHGAP17Q68EM7 881 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 RGMBQ6NW40 437 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 KIAA0408Q6ZU52 694 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 HJURPQ8NCD3 748 aaPredicted RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 PTPRHQ9HD43 1115 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 ARHGEF4Q9NR80 690 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 HBS1LQ9Y450 684 aaKnown RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 KLRG2A4D1S0 409 aaPredicted RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 PRR5-ARHGAP8B1AHC4 643 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 SMNDC1O75940 238 aaKnown RBP eCLIP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 KCNH1O95259 989 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 BCL10O95999 233 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 GSNP06396 782 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 TMED10P49755 219 aaKnown RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 MAXP61244 160 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 ARHGAP8P85298 464 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 UBAP2LQ14157 1087 aaKnown RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 NCF4Q15080 339 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 PPM1LQ5SGD2 360 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 NOL9Q5SY16 702 aaKnown RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 CERCAMQ5T4B2 595 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 ALYREFQ86V81 257 aaKnown RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 SYT12Q8IV01 421 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 OR4L1Q8NH43 312 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 MAGEC3Q8TD91 643 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 PPP1R13LQ8WUF5 828 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 OSGEPL1Q9H4B0 414 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 GOLGA2P5Q9HBQ8 144 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 MRPL17Q9NRX2 175 aaKnown RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 NRXN3Q9Y4C0 1643 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 ZNF839A8K0R7 811 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 KPNA3O00505 521 aaPredicted RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 GSC2O15499 205 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 DHX15O43143 795 aaKnown RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 TCEA3O75764 348 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 GRIA3P42263 894 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 MRPL28Q13084 256 aaKnown RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 FASTKD3Q14CZ7 662 aaKnown RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 FNBP1LQ5T0N5 605 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 GPRIN3Q6ZVF9 776 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 KCTD15Q96SI1 283 aaPredicted RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 NMUR2Q9GZQ4 415 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 VPS51Q9UID3 782 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 OTCP00480 354 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 CHN2P52757 468 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 PPIDQ08752 370 aaKnown RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 EIF2B5Q13144 721 aaKnown RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 MAPKAPK3Q16644 382 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 DDR2Q16832 855 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 SLC44A4Q53GD3 710 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 RORBQ92753 470 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 RCN3Q96D15 328 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 MCRS1Q96EZ8 462 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 MAGEB10Q96LZ2 347 aaPredicted RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 ZDHHC18Q9NUE0 388 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 THG1LQ9NWX6 298 aaKnown RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 USE1Q9NZ43 259 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 SFMBT1Q9UHJ3 866 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 AGO1Q9UL18 857 aaKnown RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 XRN1Q8IZH2 1706 aaKnown RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 RGS5O15539 181 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 LYPLA1O75608 230 aaPredicted RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 EPN2O95208 641 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 POLR2EP19388 210 aaKnown RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 CCNCP24863 283 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 HPCAL1P37235 193 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 LILRA4P59901 499 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 HSPA14Q0VDF9 509 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 ZNF621Q6ZSS3 439 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 FAM228AQ86W67 206 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 FITM2Q8N6M3 262 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 FAM13CQ8NE31 585 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 OR52K2Q8NGK3 314 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 RTKNQ9BST9 563 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 ARL8BQ9NVJ2 186 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 PNPOQ9NVS9 261 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 TRPC4Q9UBN4 977 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 AJAP1Q9UKB5 411 aaPredicted RBP11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 DUOX1Q9NRD9 1551 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 HS6ST1O60243 411 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 IDO1P14902 403 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 SP3Q02447 781 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 CREMQ03060 361 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 TNK2Q07912 1038 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 USP4Q13107 963 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 CYP2A13Q16696 494 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 ANKRD22Q5VYY1 191 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 ZDHHC24Q6UX98 284 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 TTC7BQ86TV6 843 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 DENND1CQ8IV53 801 aa11.93□□□□□ -0.5
DEPDC1-201ENST00000370966 SNX27Q96L92 541 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms