RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SLC11A2P49281 568 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 RGS19P49795 217 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 CCNG1P51959 295 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 ITKQ08881 620 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 SEPT6Q14141 434 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 LBRQ14739 615 aaKnown RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 RABGAP1LQ5R372 815 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 TSTD2Q5T7W7 516 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 RAP1GAP2Q684P5 730 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 ZNF470Q6ECI4 717 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 SLC8B1Q6J4K2 584 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 ESRP1Q6NXG1 681 aaKnown RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 RNF19BQ6ZMZ0 732 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 TTC7BQ86TV6 843 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 PLD6Q8N2A8 252 aaKnown RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 PDCD6IPQ8WUM4 868 aaKnown RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 SCG3Q8WXD2 468 aaKnown RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 AZIN2Q96A70 460 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 ZNF778Q96MU6 729 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 RAD9AQ99638 391 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 C1QTNF1Q9BXJ1 281 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 CDH19Q9H159 772 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 MAGEH1Q9H213 219 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 CAB39LQ9H9S4 337 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 TAS2R1Q9NYW7 299 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 PCDH10Q9P2E7 1040 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 ZNF212Q9UDV6 495 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 VTI1BQ9UEU0 232 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 FBXO5Q9UKT4 447 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 RIMKLBQ9ULI2 386 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 CORO1CQ9ULV4 474 aaPredicted RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 BACE2Q9Y5Z0 518 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 PRAMEF11O60813 436 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 FGF1P05230 155 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 SLC35E2BP0CK96 405 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 LAG3P18627 525 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 ARNTP27540 789 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 PRDX6P30041 224 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 SLC26A3P40879 764 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 CD86P42081 329 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 SLC1A2P43004 574 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 ALDH18A1P54886 795 aaKnown RBP14.14□□□□□ -0.15
USF1-202ENST00000368020 ZNF235Q14590 738 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 ZRSR2Q15696 482 aaKnown RBP14.14□□□□□ -0.15
USF1-202ENST00000368020 CNGA3Q16281 694 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 USP41Q3LFD5 358 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 HSF5Q4G112 596 aaPredicted RBP14.14□□□□□ -0.15
USF1-202ENST00000368020 ALFQ53S48 1182 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 ALG1LQ6GMV1 187 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 FAM117BQ6P1L5 589 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 KLC3Q6P597 504 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.14□□□□□ -0.15
USF1-202ENST00000368020 TTC9BQ8N6N2 239 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 SP7Q8TDD2 431 aaPredicted RBP14.14□□□□□ -0.15
USF1-202ENST00000368020 STYXQ8WUJ0 223 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 PSMG2Q969U7 264 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 PLD4Q96BZ4 506 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 CMTM5Q96DZ9 223 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 FEM1CQ96JP0 617 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 SCYL1Q96KG9 808 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 MIPEPQ99797 713 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 MRPL57Q9BQC6 102 aaKnown RBP14.14□□□□□ -0.15
USF1-202ENST00000368020 ZBED2Q9BTP6 218 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 DRC3Q9H069 523 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 TRPC7Q9HCX4 862 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 MTRRQ9UBK8 725 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.14□□□□□ -0.15
USF1-202ENST00000368020 RAP2CQ9Y3L5 183 aa14.14□□□□□ -0.15
USF1-202ENST00000368020 C2orf71A6NGG8 1288 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 A8MUI8 341 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 SLC22A2O15244 555 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 LYPLA1O75608 230 aaPredicted RBP14.13□□□□□ -0.15
USF1-202ENST00000368020 ENO1P06733 434 aaKnown RBP14.13□□□□□ -0.15
USF1-202ENST00000368020 TACR2P21452 398 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 CES1P23141 567 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 LEPRP48357 1165 aaKnown RBP14.13□□□□□ -0.15
USF1-202ENST00000368020 IDH3AP50213 366 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 RAP1GDS1P52306 607 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 IRF9Q00978 393 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 SLC10A7Q0GE19 358 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 DUSP4Q13115 394 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 PRKAA1Q13131 559 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 RCN2Q14257 317 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 RFTN1Q14699 578 aaPredicted RBP14.13□□□□□ -0.15
USF1-202ENST00000368020 PCSK7Q16549 785 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 FAM83EQ2M2I3 478 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 RTP2Q5QGT7 225 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 LRRC8EQ6NSJ5 796 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 TMCO2Q7Z6W1 182 aaPredicted RBP14.13□□□□□ -0.15
USF1-202ENST00000368020 FBXO22Q8NEZ5 403 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 TTC8Q8TAM2 541 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 CLP1Q92989 425 aaKnown RBP14.13□□□□□ -0.15
USF1-202ENST00000368020 IGSF8Q969P0 613 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 IFT43Q96FT9 208 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 NUDCD1Q96RS6 583 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 GDF15Q99988 308 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 DDX50Q9BQ39 737 aaKnown RBP14.13□□□□□ -0.15
USF1-202ENST00000368020 MRPL46Q9H2W6 279 aaKnown RBP14.13□□□□□ -0.15
USF1-202ENST00000368020 MFSD1Q9H3U5 465 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 ZNF395Q9H8N7 513 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms