RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PDCLQ13371 301 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PIGGQ5H8A4 983 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SCYL2Q6P3W7 929 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TRIM74Q86UV6 250 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TRIM73Q86UV7 250 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 DENND6AQ8IWF6 608 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ZZZ3Q8IYH5 903 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 NUDT16Q96DE0 195 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ETNK2Q9NVF9 386 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 WBP4O75554 376 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SLC7A1P30825 629 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SCAND1P57086 179 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PFKPQ01813 784 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PFKFB3Q16875 520 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 MEDAGQ5VYS4 303 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ADAMTS14Q8WXS8 1223 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CD101Q93033 1021 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 DYNLL2Q96FJ2 89 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF560Q96MR9 790 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PLEKHG4BQ96PX9 1271 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 LSM14BQ9BX40 385 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ANKZF1Q9H8Y5 726 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 XDHP47989 1333 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 C17orf113A0A1B0GUU1 675 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ZSCAN5CA6NGD5 496 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 C3orf70A6NLC5 250 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TTC34A8MYJ7 566 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 GNGT2O14610 69 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 RAD1O60671 282 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ATP4BP51164 291 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF169Q14929 603 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CXXC5Q7LFL8 322 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SLC7A13Q8TCU3 470 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TMA16Q96EY4 203 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SLC22A11Q9NSA0 550 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 VPS54Q9P1Q0 977 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 USP32Q8NFA0 1604 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ERN1O75460 977 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ETFAP13804 333 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 EXOSC10Q01780 885 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TRAF3Q13114 568 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 STXBP2Q15833 593 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CERS6Q6ZMG9 384 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SLC41A1Q8IVJ1 513 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 OR6Y1Q8NGX8 325 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF333Q96JL9 665 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 RNF32Q9H0A6 362 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SMYD2Q9NRG4 433 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PCDHB16Q9NRJ7 776 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PI4K2BG5E9Z4 385 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 DCAF15Q66K64 600 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 FARP1Q9Y4F1 1045 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CSNK1G3Q9Y6M4 447 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 A0A1B0GVC2 190 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CAND2O75155 1236 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TTLL9Q3SXZ7 439 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CDYL2Q8N8U2 506 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SLC9A7Q96T83 725 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 NUDT9Q9BW91 350 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SIK2Q9H0K1 926 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 OR51B5Q9H339 312 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 UCHL3P15374 230 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 DNAJA1P31689 397 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 GFOD2Q3B7J2 385 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 FOXP4Q8IVH2 680 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 E9PBE3 544 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 LYPLA1O75608 230 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 KRT34O76011 436 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 GNAO1P09471 354 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 FGFR2P21802 821 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ZAP70P43403 619 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PLTPP55058 493 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PRKCQQ04759 706 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 VASH1Q7L8A9 365 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 MAGEE2Q8TD90 523 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 INPP5EQ9NRR6 644 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 MSH4O15457 936 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 KHDRBS3O75525 346 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PGAM1P18669 254 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF790Q6PG37 636 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 UGT2A3Q6UWM9 527 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 RNF180Q86T96 592 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CCDC71Q8IV32 467 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 MARVELD2Q8N4S9 558 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 DNAJA4Q8WW22 397 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 HTRA1Q92743 480 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TRIB3Q96RU7 358 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 USP44Q9H0E7 712 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ACTR3BQ9P1U1 418 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 RGS11O94810 467 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 CD4P01730 458 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 MYL9P24844 172 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ACTBP60709 375 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ACTG1P63261 375 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 MGAT5Q09328 741 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 GRTP1Q5TC63 336 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 THAP5Q7Z6K1 395 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ELF4Q99607 663 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 DBNDD2Q9BQY9 259 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 KANSL3Q9P2N6 904 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms