RNA–Protein interactions for RNA: ENST00000363347.1

RNU6-839P-201, Transcript of RNA, U6 small nuclear 839, pseudogene, humanhuman

BASIC

Gene RNU6-839P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-839P-201ENST00000363347 BMP5P22003 454 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 MPGP29372 298 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 PTGER1P34995 402 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 KRT20P35900 424 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 PSMB10P40306 273 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 GARSP41250 739 aaKnown RBP4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 ARHGAP25P42331 645 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 GABRB2P47870 512 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 CLCN5P51795 746 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 RPS13P62277 151 aaKnown RBP4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 GHRHRQ02643 423 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 FOXF2Q12947 444 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 CSTF3Q12996 717 aaKnown RBP4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 PKP1Q13835 747 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 HIST2H2ACQ16777 129 aaPredicted RBP4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 ALG11Q2TAA5 492 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 DUSP28Q4G0W2 176 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 HMBOX1Q6NT76 420 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 TMEM154Q6P9G4 183 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 KDELC2Q7Z4H8 507 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 GALNT5Q7Z7M9 940 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 SERPINA11Q86U17 422 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 CNGA4Q8IV77 575 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 FAM185AQ8N0U4 392 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 C17orf53Q8N3J3 647 aaPredicted RBP4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 GALNT16Q8N428 558 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 SNRNP27Q8WVK2 155 aaKnown RBP4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 IGFBPL1Q8WX77 278 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 PSPC1Q8WXF1 523 aaKnown RBP4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 POMGNT1Q8WZA1 660 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 ZC3HAV1LQ96H79 300 aaKnown RBP4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 CMTM3Q96MX0 182 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 SIN3AQ96ST3 1273 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 MAP7D2Q96T17 732 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 MXD3Q9BW11 206 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 STRA6Q9BX79 667 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 SH2D4AQ9H788 454 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 SPAG4Q9NPE6 437 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 PNRC2Q9NPJ4 139 aaKnown RBP4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 RRP7BPQ9NSQ0 103 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 HAO1Q9UJM8 370 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 CARD8Q9Y2G2 431 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 FAM96BQ9Y3D0 163 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 TTLL3Q9Y4R7 772 aa4.5□□□□□ -1.69
RNU6-839P-201ENST00000363347 A0A096LPK6 155 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 KIR2DS5A0A0G2JLQ3 304 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 HSPB2A8KAH6 182 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 USP17L23D6RBM5 183 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 KIR2DS3K7RE56 304 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 ATP2C2O75185 946 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 PCNAP12004 261 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 CDH2P19022 906 aaPredicted RBP4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 CDAP32320 146 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 RFC1P35251 1148 aaPredicted RBP4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 PIP4K2AP48426 406 aaPredicted RBP4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 CENPAP49450 140 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 F2RL1P55085 397 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 IRX6P78412 446 aaPredicted RBP4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 ZNF91Q05481 1191 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 FGFBP1Q14512 234 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 CRYMQ14894 314 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 HSPB2Q16082 182 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 COL28A1Q2UY09 1125 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 PAPD7Q5XG87 772 aaKnown RBP4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 CES5AQ6NT32 575 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 TMCO3Q6UWJ1 677 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 PTF1AQ7RTS3 328 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 GSTA5Q7RTV2 222 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 RD3Q7Z3Z2 195 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 ARHGAP12Q8IWW6 846 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 HORMAD2Q8N7B1 307 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 NEK9Q8TD19 979 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 WIPF2Q8TF74 440 aaPredicted RBP4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 RNF183Q96D59 192 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 MMABQ96EY8 250 aaPredicted RBP4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 C1orf74Q96LT6 269 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 SERINC2Q96SA4 455 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 TUBB6Q9BUF5 446 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 MAK16Q9BXY0 300 aaKnown RBP4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 LHPPQ9H008 270 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 SMARCAD1Q9H4L7 1026 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 KIF9Q9HAQ2 790 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 THSD1Q9NS62 852 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 RNF146Q9NTX7 359 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 SPATS2LQ9NUQ6 558 aaKnown RBP4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 PLK2Q9NYY3 685 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 AGO2Q9UKV8 859 aaKnown RBP4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 TMEM5Q9Y2B1 443 aa4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 POLR2AP24928 1970 aaKnown RBP4.49□□□□□ -1.69
RNU6-839P-201ENST00000363347 TRBV5-3A0A0A0MS03 114 aa4.48□□□□□ -1.69
RNU6-839P-201ENST00000363347 SMIM35A0A1B0GVV1 85 aa4.48□□□□□ -1.69
RNU6-839P-201ENST00000363347 FRMD3A2A2Y4 597 aa4.48□□□□□ -1.69
RNU6-839P-201ENST00000363347 C17orf102A2RUQ5 167 aa4.48□□□□□ -1.69
RNU6-839P-201ENST00000363347 IPO7O95373 1038 aaKnown RBP4.48□□□□□ -1.69
RNU6-839P-201ENST00000363347 LATS1O95835 1130 aa4.48□□□□□ -1.69
RNU6-839P-201ENST00000363347 CLTBP09497 229 aa4.48□□□□□ -1.69
RNU6-839P-201ENST00000363347 CTSAP10619 480 aa4.48□□□□□ -1.69
RNU6-839P-201ENST00000363347 IL7RP16871 459 aa4.48□□□□□ -1.69
RNU6-839P-201ENST00000363347 ATP5F1P24539 256 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms