RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CNSTQ6PJW8 725 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 GK5Q6ZS86 529 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 RNF135Q8IUD6 432 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 SPNS2Q8IVW8 549 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 CCDC117Q8IWD4 279 aaPredicted RBP8.67□□□□□ -1.02
RFX3-202ENST00000358730 ARHGAP18Q8N392 663 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 LZTR1Q8N653 840 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 OR10T2Q8NGX3 314 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 MRGPRX2Q96LB1 330 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 PPP1R2P1Q96PQ5 205 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 HAPLN3Q96S86 360 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 SPATA16Q9BXB7 569 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 MRM3Q9HC36 420 aaKnown RBP8.67□□□□□ -1.02
RFX3-202ENST00000358730 CLIC5Q9NZA1 410 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 MPP6Q9NZW5 540 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 BCAP29Q9UHQ4 241 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 VPS28Q9UK41 221 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 NUDT5Q9UKK9 219 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 GIT1Q9Y2X7 761 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 MYADML2A6NDP7 307 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 SDHDO14521 159 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 ATP5F1P24539 256 aaPredicted RBP8.67□□□□□ -1.02
RFX3-202ENST00000358730 HOXC13P31276 330 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 PLK1P53350 603 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 SLC5A3P53794 718 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 RPL26P61254 145 aaKnown RBP8.67□□□□□ -1.02
RFX3-202ENST00000358730 MS4A2Q01362 244 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 POU4F1Q01851 419 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 PTK2BQ14289 1009 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 MANEALQ5VSG8 457 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 SPRYD7Q5W111 196 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 NEPROQ6NW34 567 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 ZFAND2BQ8WV99 257 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 CASP10Q92851 521 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 SMOC2Q9H3U7 446 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 COPS7BQ9H9Q2 264 aaPredicted RBP8.67□□□□□ -1.02
RFX3-202ENST00000358730 ABCC13Q9NSE7 274 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 CEP350Q5VT06 3117 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 NLRC5Q86WI3 1866 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 TCAF2A6NFQ2 919 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 E9PAM4 449 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 PMLP29590 882 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 GRIA2P42262 883 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 SULT2A1Q06520 285 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 TLR1Q15399 786 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 FAM83EQ2M2I3 478 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 UGT2A3Q6UWM9 527 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 LRRTM3Q86VH5 581 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 SPATA24Q86W54 205 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 SCML4Q8N228 414 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 FAM156AQ8NDB6 213 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 CEP70Q8NHQ1 597 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 DLG3Q92796 817 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 MAELQ96JY0 434 aaKnown RBP8.67□□□□□ -1.02
RFX3-202ENST00000358730 PRKD2Q9BZL6 878 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 Q9H521 79 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 IGSF5Q9NSI5 407 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 TBC1D13Q9NVG8 400 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 RIMS3Q9UJD0 308 aa8.67□□□□□ -1.02
RFX3-202ENST00000358730 KCNU1A8MYU2 1149 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 PIM1P11309 404 aaPredicted RBP8.66□□□□□ -1.02
RFX3-202ENST00000358730 ARSAP15289 507 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 HTR7P34969 479 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 PGFP49763 221 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 WNT3AP56704 352 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 EIF4EBP2Q13542 120 aaPredicted RBP8.66□□□□□ -1.02
RFX3-202ENST00000358730 RFTN1Q14699 578 aaPredicted RBP8.66□□□□□ -1.02
RFX3-202ENST00000358730 EML3Q32P44 896 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 ZNF789Q5FWF6 425 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 TECRLQ5HYJ1 363 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 OVOS1Q6IE37 1185 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 KLC3Q6P597 504 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 ISLR2Q6UXK2 745 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 RANBP10Q6VN20 620 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 RPS27LQ71UM5 84 aaKnown RBP8.66□□□□□ -1.02
RFX3-202ENST00000358730 AFAP1L2Q8N4X5 818 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 RTL3Q8N8U3 475 aaKnown RBP8.66□□□□□ -1.02
RFX3-202ENST00000358730 PIP4K2CQ8TBX8 421 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 PKMYT1Q99640 499 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 OLFM1Q99784 485 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 SENP6Q9GZR1 1112 aaPredicted RBP8.66□□□□□ -1.02
RFX3-202ENST00000358730 ADA2Q9NZK5 511 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 IPO11Q9UI26 975 aaKnown RBP8.66□□□□□ -1.02
RFX3-202ENST00000358730 IQCA1LA6NCM1 817 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 A8MT66 165 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 BCAS2O75934 225 aaPredicted RBP8.66□□□□□ -1.02
RFX3-202ENST00000358730 CHRNA1P02708 482 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 ETS2P15036 469 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 KCNA5P22460 613 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 GRIK1P39086 918 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 DNAJB13P59910 316 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 TSPY1Q01534 308 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 SATB1Q01826 763 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 ITKQ08881 620 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 AGAP9Q5VTM2 703 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 BEND5Q7L4P6 421 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 C14orf80Q86SX3 495 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 LILRA2Q8N149 483 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 PELI3Q8N2H9 469 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 CATSPER1Q8NEC5 780 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms