RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 FDFT1P37268 417 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 PSMD8P48556 350 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 WNT3AP56704 352 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 BCL2L1Q07817 233 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 OR2T3Q8NH03 318 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 PIP4K2CQ8TBX8 421 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 PDCD6IPQ8WUM4 868 aaKnown RBP25.63■■□□□ 1.69
SSBP3-202ENST00000357475 KLHL32Q96NJ5 620 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 APOL2Q9BQE5 337 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 TDRD1Q9BXT4 1180 aaKnown RBP25.63■■□□□ 1.69
SSBP3-202ENST00000357475 ATP13A3Q9H7F0 1226 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 CHKBQ9Y259 395 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 MYLKQ15746 1914 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 TCRBV21S2A2A0A5A6 115 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 TP73O15350 636 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 PRLP01236 227 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 IL1BP01584 269 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 APRTP07741 180 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 AOC1P19801 751 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 CES1P23141 567 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 GRIA1P42261 906 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 RPS14P62263 151 aaKnown RBP25.63■■□□□ 1.69
SSBP3-202ENST00000357475 SATB1Q01826 763 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 PRPSAP1Q14558 356 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 RALGPS1Q5JS13 557 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 C4orf22Q6V702 233 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 GDPD4Q6W3E5 623 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 TUBGCP5Q96RT8 1024 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.63■■□□□ 1.69
SSBP3-202ENST00000357475 FARP1Q9Y4F1 1045 aaPredicted RBP25.63■■□□□ 1.69
SSBP3-202ENST00000357475 V9GYY5 206 aaPredicted RBP25.63■■□□□ 1.69
SSBP3-202ENST00000357475 DNALI1O14645 258 aaPredicted RBP25.62■■□□□ 1.69
SSBP3-202ENST00000357475 ALOX15BO15296 676 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 ANXA9O76027 345 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 TMEM63AO94886 807 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 AGTP01019 485 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 CHRNA4P43681 627 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 MAPK8P45983 427 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 GEMP55040 296 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 KCNJ11Q14654 390 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 PTPRRQ15256 657 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 RNASEH2BQ5TBB1 312 aaKnown RBP25.62■■□□□ 1.69
SSBP3-202ENST00000357475 IZUMO3Q5VZ72 239 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 ARRDC3Q96B67 414 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 HHIPQ96QV1 700 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 TRIB3Q96RU7 358 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 FICDQ9BVA6 458 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 COL25A1Q9BXS0 654 aaPredicted RBP25.62■■□□□ 1.69
SSBP3-202ENST00000357475 SUV39H2Q9H5I1 410 aa25.62■■□□□ 1.69
SSBP3-202ENST00000357475 PIH1D1Q9NWS0 290 aaKnown RBP25.62■■□□□ 1.69
SSBP3-202ENST00000357475 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.61■■□□□ 1.69
SSBP3-202ENST00000357475 BHMG1C9JSJ3 638 aaPredicted RBP25.61■■□□□ 1.69
SSBP3-202ENST00000357475 KPNA3O00505 521 aaPredicted RBP25.61■■□□□ 1.69
SSBP3-202ENST00000357475 HTRA2O43464 458 aaPredicted RBP25.61■■□□□ 1.69
SSBP3-202ENST00000357475 ATG13O75143 517 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 NDUFV2P19404 249 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 SERPINA4P29622 427 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 ADRA1AP35348 466 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 GUCY2DQ02846 1103 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 RAD51Q06609 339 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 MPP3Q13368 585 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 GALNT3Q14435 633 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 LRRC73Q5JTD7 316 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 TMPRSS6Q8IU80 811 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 TMIEQ8NEW7 156 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 CCHCR1Q8TD31 782 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 CD93Q9NPY3 652 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 VPS45Q9NRW7 570 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 TPX2Q9ULW0 747 aaKnown RBP25.61■■□□□ 1.69
SSBP3-202ENST00000357475 AAR2Q9Y312 384 aaKnown RBP25.61■■□□□ 1.69
SSBP3-202ENST00000357475 PCDHB9Q9Y5E1 797 aa25.61■■□□□ 1.69
SSBP3-202ENST00000357475 E7EVH7 732 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 MID1O15344 667 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 FZD6O60353 706 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 AP2A1O95782 977 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 PRNPP04156 253 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 PRKCGP05129 697 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 GABRG2P18507 467 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 CST6Q15828 149 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 SPEM1Q8N4L4 309 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 SLC25A41Q8N5S1 370 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 TMEM105Q8N8V8 129 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 LRRC45Q96CN5 670 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 ECHDC3Q96DC8 303 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 SNF8Q96H20 258 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 MRGPRX1Q96LB2 322 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 GRHL1Q9NZI5 618 aa25.6■■□□□ 1.69
SSBP3-202ENST00000357475 UTP11Q9Y3A2 253 aaKnown RBP25.6■■□□□ 1.69
SSBP3-202ENST00000357475 SEC31AO94979 1220 aaKnown RBP25.59■■□□□ 1.69
SSBP3-202ENST00000357475 PGLSO95336 258 aa25.59■■□□□ 1.69
SSBP3-202ENST00000357475 MAGEA6P43360 314 aa25.59■■□□□ 1.69
SSBP3-202ENST00000357475 LMAN1P49257 510 aa25.59■■□□□ 1.69
SSBP3-202ENST00000357475 CDK18Q07002 472 aa25.59■■□□□ 1.69
SSBP3-202ENST00000357475 SLC14A2Q15849 920 aa25.59■■□□□ 1.69
SSBP3-202ENST00000357475 GLE1Q53GS7 698 aaKnown RBP25.59■■□□□ 1.69
SSBP3-202ENST00000357475 PARS2Q7L3T8 475 aaKnown RBP25.59■■□□□ 1.69
SSBP3-202ENST00000357475 AADATQ8N5Z0 425 aa25.59■■□□□ 1.69
SSBP3-202ENST00000357475 NAT8LQ8N9F0 302 aa25.59■■□□□ 1.69
SSBP3-202ENST00000357475 HMGB4Q8WW32 186 aa25.59■■□□□ 1.69
SSBP3-202ENST00000357475 PBXIP1Q96AQ6 731 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms