RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 GNPTGQ9UJJ9 305 aa14.96□□□□□ -0.02
CHD4-201ENST00000357008 TDRKHQ9Y2W6 561 aaKnown RBP14.96□□□□□ -0.02
CHD4-201ENST00000357008 BBIP1A8MTZ0 92 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 TM7SF2O76062 418 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 SLC7A2P52569 658 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 SREBF2Q12772 1141 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 ZACNQ401N2 412 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 AFTPHQ6ULP2 937 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 FAM47BQ8NA70 645 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 HOPXQ9BPY8 73 aaPredicted RBP14.95□□□□□ -0.02
CHD4-201ENST00000357008 TNFSF13BQ9Y275 285 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 TBC1D21Q8IYX1 336 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 UBE2E3Q969T4 207 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 SENP8Q96LD8 212 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 NLNQ9BYT8 704 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 DHX33Q9H6R0 707 aaKnown RBP14.95□□□□□ -0.02
CHD4-201ENST00000357008 SH3BGRLO75368 114 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 ARMC8Q8IUR7 673 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 ATL1Q8WXF7 558 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 TRMOQ9BU70 441 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 RCVRNP35243 200 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 ATP6V0D1P61421 351 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 NANOGNBQ7Z5D8 188 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 MKL1Q969V6 931 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 KIFC1Q9BW19 673 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 FBXO5Q9UKT4 447 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 ANGPT4Q9Y264 503 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 BTRCQ9Y297 605 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 CHD1O14646 1710 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 RECQL4O94761 1208 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 ERBB2P04626 1255 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 CKBP12277 381 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 SERPINA4P29622 427 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 CDK9P50750 372 aaKnown RBP14.95□□□□□ -0.02
CHD4-201ENST00000357008 LPCAT4Q643R3 524 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 CYP20A1Q6UW02 462 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 MAGEB10Q96LZ2 347 aaPredicted RBP14.95□□□□□ -0.02
CHD4-201ENST00000357008 PLLPQ9Y342 182 aa14.95□□□□□ -0.02
CHD4-201ENST00000357008 OTCP00480 354 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 NTSP30990 170 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 RPL38P63173 70 aaKnown RBP14.94□□□□□ -0.02
CHD4-201ENST00000357008 ACVR2BQ13705 512 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 CDYL2Q8N8U2 506 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 PGLYRP2Q96PD5 576 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 TRIM39Q9HCM9 518 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 MARCH2Q9P0N8 246 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 RAPGEFL1Q9UHV5 662 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 MAGEL2Q9UJ55 1249 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 SAMHD1Q9Y3Z3 626 aaKnown RBP14.94□□□□□ -0.02
CHD4-201ENST00000357008 HBS1LQ9Y450 684 aaKnown RBP14.94□□□□□ -0.02
CHD4-201ENST00000357008 ANKDD1BA6NHY2 528 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 HNRNPLP14866 589 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHD4-201ENST00000357008 TNNI3P19429 210 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 RPL3P39023 403 aaKnown RBP14.94□□□□□ -0.02
CHD4-201ENST00000357008 USP4Q13107 963 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 PYDC2Q56P42 97 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 ECHDC2Q86YB7 292 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 FAM20CQ8IXL6 584 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 NELL1Q92832 810 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 TMEM106CQ9BVX2 250 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 NMUR2Q9GZQ4 415 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 MAGEC1O60732 1142 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 PCDH8O95206 1070 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 NADKO95544 446 aaPredicted RBP14.94□□□□□ -0.02
CHD4-201ENST00000357008 CRHR1P34998 444 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 SLC15A2Q16348 729 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 FAM171A1Q5VUB5 890 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 USP45Q70EL2 814 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 PHF10Q8WUB8 498 aaKnown RBP14.94□□□□□ -0.02
CHD4-201ENST00000357008 SLC44A1Q8WWI5 657 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 AP3S1Q92572 193 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 VMP1Q96GC9 406 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 SLC38A2Q96QD8 506 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 SMPD4Q9NXE4 827 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 ING4Q9UNL4 249 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 LYVE1Q9Y5Y7 322 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 MEIS2O14770 477 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 DDX3YO15523 660 aaKnown RBP14.94□□□□□ -0.02
CHD4-201ENST00000357008 KLF10Q13118 480 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 ZC3H12AQ5D1E8 599 aaKnown RBP14.94□□□□□ -0.02
CHD4-201ENST00000357008 DDI2Q5TDH0 399 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 ANKRD52Q8NB46 1076 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 CD101Q93033 1021 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 C18orf25Q96B23 403 aaPredicted RBP14.94□□□□□ -0.02
CHD4-201ENST00000357008 SPATA5L1Q9BVQ7 753 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 RNF225M0QZC1 329 aaPredicted RBP14.94□□□□□ -0.02
CHD4-201ENST00000357008 NRP2O60462 931 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 UMPSP11172 480 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 WEE1P30291 646 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 HIRAP54198 1017 aaPredicted RBP14.94□□□□□ -0.02
CHD4-201ENST00000357008 ACOX1Q15067 660 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 SLC39A12Q504Y0 691 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 ADAMTSL2Q86TH1 951 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 DENND6AQ8IWF6 608 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 LRRC17Q8N6Y2 441 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 QKIQ96PU8 341 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHD4-201ENST00000357008 ZFP14Q9HCL3 533 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 EURLQ9NYK6 297 aa14.94□□□□□ -0.02
CHD4-201ENST00000357008 IQGAP1P46940 1657 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 AVILO75366 819 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms