RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 QKIQ96PU8 341 aaKnown RBP eCLIP9.48□□□□□ -0.892e-6■■■■□ 23.5
SMG6-202ENST00000354901 MED10Q9BTT4 135 aa9.48□□□□□ -0.89
SMG6-202ENST00000354901 GIMAP4Q9NUV9 329 aa9.48□□□□□ -0.89
SMG6-202ENST00000354901 NCKIPSDQ9NZQ3 722 aa9.48□□□□□ -0.89
SMG6-202ENST00000354901 EMCNQ9ULC0 261 aa9.48□□□□□ -0.89
SMG6-202ENST00000354901 TIMM13Q9Y5L4 95 aaPredicted RBP9.48□□□□□ -0.89
SMG6-202ENST00000354901 ZSCAN5BA6NJL1 495 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 KLF11O14901 512 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 CCNT2O60583 730 aaKnown RBP9.47□□□□□ -0.89
SMG6-202ENST00000354901 ACADVLP49748 655 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 BCAT1P54687 386 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 IFRD2Q12894 506 aaPredicted RBP9.47□□□□□ -0.89
SMG6-202ENST00000354901 PRAMEF19Q5SWL8 479 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 LDLRAD1Q5T700 205 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 TEDDM1Q5T9Z0 273 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 UBE2UQ5VVX9 321 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 C9orf57Q5W0N0 161 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 SLC26A9Q7LBE3 791 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 DPP9Q86TI2 863 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 GPR180Q86V85 440 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 CADM3Q8N126 398 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 PSD4Q8NDX1 1056 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 TBC1D15Q8TC07 691 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 PIWIL2Q8TC59 973 aaKnown RBP9.47□□□□□ -0.89
SMG6-202ENST00000354901 RNF139Q8WU17 664 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 AGAP2Q99490 1192 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 NFKBIZQ9BYH8 718 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 MROH8Q9H579 483 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 STN1Q9H668 368 aaKnown RBP9.47□□□□□ -0.89
SMG6-202ENST00000354901 TBC1D14Q9P2M4 693 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 SLC27A5Q9Y2P5 690 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 LRRC37A2A6NM11 1700 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 KPNA7A9QM74 516 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 MGEA5O60502 916 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 TPSB2P20231 275 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 SERPINB9P50453 376 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 RAD23AP54725 363 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 SEMA5AQ13591 1074 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 TPSAB1Q15661 275 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 FXNQ16595 210 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 PUS10Q3MIT2 529 aaKnown RBP9.47□□□□□ -0.89
SMG6-202ENST00000354901 WDR45BQ5MNZ6 344 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 MARCH8Q5T0T0 291 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 USP43Q70EL4 1123 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 SNX32Q86XE0 403 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 SPNS2Q8IVW8 549 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 ANKRD52Q8NB46 1076 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 LRRC4Q9HBW1 653 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 TRIM39Q9HCM9 518 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 WDR6Q9NNW5 1121 aaKnown RBP9.47□□□□□ -0.89
SMG6-202ENST00000354901 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.47□□□□□ -0.89
SMG6-202ENST00000354901 MOCS1Q9NZB8 636 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 SNX10Q9Y5X0 201 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 C7orf72A4D263 438 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 PCP4L1A6NKN8 68 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 FAM72CH0Y354 149 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 PLIN3O60664 434 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 AMHP03971 560 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 FGF3P11487 239 aaPredicted RBP9.47□□□□□ -0.89
SMG6-202ENST00000354901 ARRB2P32121 409 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 MAGEA3P43357 314 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 ARPP19P56211 112 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 SOX4Q06945 474 aaPredicted RBP9.47□□□□□ -0.89
SMG6-202ENST00000354901 FAM72AQ5TYM5 149 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 FAM72DQ6L9T8 149 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 SLC27A1Q6PCB7 646 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 FAM72BQ86X60 149 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 ZNF567Q8N184 647 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 SIX6OS1Q8N1H7 587 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 PLD6Q8N2A8 252 aaKnown RBP9.47□□□□□ -0.89
SMG6-202ENST00000354901 APPL2Q8NEU8 664 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 BPIFB6Q8NFQ5 453 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 SLC7A14Q8TBB6 771 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 KBTBD7Q8WVZ9 684 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 ARNTL2Q8WYA1 636 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 BIRC8Q96P09 236 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 RANBP9Q96S59 729 aa9.47□□□□□ -0.89
SMG6-202ENST00000354901 DDX28Q9NUL7 540 aaKnown RBP9.47□□□□□ -0.89
SMG6-202ENST00000354901 C6orf203Q9P0P8 240 aaPredicted RBP9.47□□□□□ -0.89
SMG6-202ENST00000354901 DYNC1LI2O43237 492 aaPredicted RBP9.46□□□□□ -0.89
SMG6-202ENST00000354901 AP1G1O43747 822 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 SNNO75324 88 aaPredicted RBP9.46□□□□□ -0.89
SMG6-202ENST00000354901 MFN2O95140 757 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 CHRNB1P11230 501 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 PTPN9P43378 593 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 MAP3K7CLP57077 242 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 SNX16P57768 344 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 PCLAFQ15004 111 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 MBLAC2Q68D91 279 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 IGFN1Q86VF2 1251 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 C11orf74Q86VG3 221 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 OR6J1Q8NGC5 347 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 DNAJB3Q8WWF6 145 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 LRTOMTQ8WZ04 291 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 CMTM5Q96DZ9 223 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 MIR1-1HGQ9H1L0 117 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 DNAJC28Q9NX36 388 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 TLL2Q9Y6L7 1015 aa9.46□□□□□ -0.89
SMG6-202ENST00000354901 ZNF638Q14966 1978 aaKnown RBP9.46□□□□□ -0.89
SMG6-202ENST00000354901 TMEM114B3SHH9 223 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms