RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SPPL2BQ8TCT7 592 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 ATP6V1E2Q96A05 226 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 SGF29Q96ES7 293 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 HIC2Q96JB3 615 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 SENP6Q9GZR1 1112 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-202ENST00000352393 UNC93B1Q9H1C4 597 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 ABHD16BQ9H3Z7 469 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 ATXN10Q9UBB4 475 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 DMTF1Q9Y222 760 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 H0YJX3 145 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 DFFAO00273 331 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 ATP6V1B1P15313 513 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 LHX1P48742 406 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 TRIM25Q14258 630 aaKnown RBP24.76■■□□□ 1.55
CPNE1-202ENST00000352393 SQLEQ14534 574 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 MGAT5BQ3V5L5 792 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 TECRLQ5HYJ1 363 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 IQSEC1Q6DN90 963 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 ZNF470Q6ECI4 717 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 KIAA0930Q6ICG6 404 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-202ENST00000352393 TMEM86AQ8N2M4 240 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 ATPAF2Q8N5M1 289 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 FAR2Q96K12 515 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 MEAF6Q9HAF1 191 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 MRPL40Q9NQ50 206 aaKnown RBP24.76■■□□□ 1.55
CPNE1-202ENST00000352393 MRGBPQ9NV56 204 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 CACNA2D2Q9NY47 1150 aa24.76■■□□□ 1.55
CPNE1-202ENST00000352393 NYNRINQ9P2P1 1898 aaKnown RBP24.75■■□□□ 1.55
CPNE1-202ENST00000352393 NEMP2A6NFY4 417 aa24.75■■□□□ 1.55
CPNE1-202ENST00000352393 E7ENX8 843 aa24.75■■□□□ 1.55
CPNE1-202ENST00000352393 TRIM24O15164 1050 aa24.75■■□□□ 1.55
CPNE1-202ENST00000352393 HNRNPLP14866 589 aaKnown RBP eCLIP24.75■■□□□ 1.552e-8■□□□□ 10.1
CPNE1-202ENST00000352393 POU4F1Q01851 419 aa24.75■■□□□ 1.55
CPNE1-202ENST00000352393 LRP8Q14114 963 aa24.75■■□□□ 1.55
CPNE1-202ENST00000352393 MAPRE2Q15555 327 aa24.75■■□□□ 1.55
CPNE1-202ENST00000352393 PSMD5Q16401 504 aa24.75■■□□□ 1.55
CPNE1-202ENST00000352393 IYDQ6PHW0 289 aa24.75■■□□□ 1.55
CPNE1-202ENST00000352393 PCDH20Q8N6Y1 951 aaKnown RBP24.75■■□□□ 1.55
CPNE1-202ENST00000352393 DDI1Q8WTU0 396 aa24.75■■□□□ 1.55
CPNE1-202ENST00000352393 EZH1Q92800 747 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-202ENST00000352393 FBP2O00757 339 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 PENKP01210 267 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-202ENST00000352393 CPB1P15086 417 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 GEMP55040 296 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 PFKPQ01813 784 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 STX5Q13190 355 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 PDAP1Q13442 181 aaKnown RBP24.74■■□□□ 1.55
CPNE1-202ENST00000352393 REP15Q6BDI9 236 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 BORAQ6PGQ7 559 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 B4GALNT2Q8NHY0 566 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 ZFP28Q8NHY6 868 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 IRGQQ8WZA9 623 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 SMARCD1Q96GM5 515 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 TSPYL2Q9H2G4 693 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-202ENST00000352393 RWDD4Q6NW29 188 aaKnown RBP24.74■■□□□ 1.55
CPNE1-202ENST00000352393 DPP9Q86TI2 863 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 DQX1Q8TE96 717 aaKnown RBP24.74■■□□□ 1.55
CPNE1-202ENST00000352393 ZNF597Q96LX8 424 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 TINF2Q9BSI4 451 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 TRPC7Q9HCX4 862 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 TNFRSF12AQ9NP84 129 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 FBXO5Q9UKT4 447 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 AP4S1Q9Y587 144 aa24.74■■□□□ 1.55
CPNE1-202ENST00000352393 ARSAP15289 507 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 PAMP19021 973 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 MFSD10Q14728 455 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 ZNF280DQ6N043 979 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 ALDH16A1Q8IZ83 802 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 RHOBTB2Q9BYZ6 727 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 CSNK1G1Q9HCP0 422 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 TMCO1Q9UM00 188 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 TIMM13Q9Y5L4 95 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-202ENST00000352393 BTBD19C9JJ37 291 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 AURKAO14965 403 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 TREHO43280 583 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 MAFKO60675 156 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 KCNA5P22460 613 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 CYP2C18P33260 490 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 NR1H2P55055 460 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 C1QTNF8P60827 252 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 RHDQ02161 417 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 FASTKQ14296 549 aaKnown RBP24.73■■□□□ 1.55
CPNE1-202ENST00000352393 GRB14Q14449 540 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 RBM20Q5T481 1227 aaKnown RBP24.73■■□□□ 1.55
CPNE1-202ENST00000352393 BTBD8Q5XKL5 378 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 EME1Q96AY2 570 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 DUS3LQ96G46 650 aaKnown RBP24.73■■□□□ 1.55
CPNE1-202ENST00000352393 PCDHAC1Q9H158 963 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 TRPV6Q9H1D0 765 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 ENTPD7Q9NQZ7 604 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 CDH9Q9ULB4 789 aa24.73■■□□□ 1.55
CPNE1-202ENST00000352393 HEATR9A2RTY3 570 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 C7orf72A4D263 438 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 A8MT66 165 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 DYNC1LI2O43237 492 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-202ENST00000352393 IGLV3-25P01717 112 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 PSMC3P17980 439 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 CRYBB1P53674 252 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-202ENST00000352393 INHBCP55103 352 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 TXNL4AP83876 142 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms