RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 RPS8P62241 208 aaKnown RBP13.37□□□□□ -0.27
IFT88-202ENST00000351808 C19orf57Q0VDD7 668 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 PICALMQ13492 652 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 PDK2Q15119 407 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 PPP1R3AQ16821 1122 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 REP15Q6BDI9 236 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 SPATC1Q76KD6 591 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 SPRED1Q7Z699 444 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 EMC1Q8N766 993 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 BRSK1Q8TDC3 778 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 BTN2A3PQ96KV6 586 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 RSAD1Q9HA92 442 aa13.37□□□□□ -0.27
IFT88-202ENST00000351808 TMEM150BA6NC51 233 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 SPDYE2BA6NHP3 402 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 H0Y858 1186 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 AREL1O15033 823 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 SPDYE6P0CI01 402 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 SLURP2P0DP57 97 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 ARSAP15289 507 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 IL10P22301 178 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 GSTM2P28161 218 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 TNFAIP2Q03169 654 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 CUL2Q13617 745 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 SELPLGQ14242 412 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 ACAP2Q15057 778 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 KIZQ2M2Z5 673 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 SPDYE2Q495Y8 402 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 ATAD3CQ5T2N8 411 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 CYP20A1Q6UW02 462 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 CATSPER4Q7RTX7 472 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 SLC51BQ86UW2 128 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 NIPA2Q8N8Q9 360 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 HDAC10Q969S8 669 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 RMDN1Q96DB5 314 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 SDCBP2Q9H190 292 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 DHX35Q9H5Z1 703 aaKnown RBP13.36□□□□□ -0.27
IFT88-202ENST00000351808 SLC38A10Q9HBR0 1119 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 APOBEC3GQ9HC16 384 aaKnown RBP13.36□□□□□ -0.27
IFT88-202ENST00000351808 SNX15Q9NRS6 342 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 MTMR10Q9NXD2 777 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 CCDC167Q9P0B6 97 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 EGFL7Q9UHF1 273 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 GGA1Q9UJY5 639 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 PTPRFP10586 1907 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 KPNA7A9QM74 516 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 F5H423 210 aaPredicted RBP13.36□□□□□ -0.27
IFT88-202ENST00000351808 hCG_2039718K7EN88 272 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 UPK1BO75841 260 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 INMTO95050 263 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 SEC24AO95486 1093 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 MAPTP10636 758 aaKnown RBP13.36□□□□□ -0.27
IFT88-202ENST00000351808 IL7RP16871 459 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 OXTRP30559 389 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 HADHAP40939 763 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 ACOT2P49753 483 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 CCNA1P78396 465 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 IRF9Q00978 393 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 CNTN2Q02246 1040 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 STX5Q13190 355 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 DGUOKQ16854 277 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 ADPRMQ3LIE5 342 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 SAMD4BQ5PRF9 694 aaKnown RBP13.36□□□□□ -0.27
IFT88-202ENST00000351808 STEAP3Q658P3 488 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 PAGE2Q7Z2X7 111 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 GALNT12Q8IXK2 581 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 RASSF5Q8WWW0 418 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 GLMNQ92990 594 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 DMRTB1Q96MA1 342 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 FAM213AQ9BRX8 229 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 AMNQ9BXJ7 453 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 CHRAC1Q9NRG0 131 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 TBC1D13Q9NVG8 400 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 NUDT5Q9UKK9 219 aa13.36□□□□□ -0.27
IFT88-202ENST00000351808 TMEM233B4DJY2 109 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 MEN1O00255 615 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 ZW10O43264 779 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 MTSS1O43312 755 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 METTL18O95568 372 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 EIF2DP41214 584 aaKnown RBP13.35□□□□□ -0.27
IFT88-202ENST00000351808 MAGEA3P43357 314 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 ADARB1P78563 741 aaKnown RBP13.35□□□□□ -0.27
IFT88-202ENST00000351808 GPLD1P80108 840 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 NIPAL4Q0D2K0 466 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 BST2Q10589 180 aaKnown RBP13.35□□□□□ -0.27
IFT88-202ENST00000351808 CBLBQ13191 982 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 IMPG1Q17R60 797 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 AGKQ53H12 422 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 USP37Q86T82 979 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 SLC51AQ86UW1 340 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 LACC1Q8IV20 430 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 PQLC3Q8N755 202 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 CELF2-AS1Q8N7Q2 184 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 OR6F1Q8NGZ6 308 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 RHOXF1Q8NHV9 184 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 CDKL2Q92772 493 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 RPL10LQ96L21 214 aaKnown RBP13.35□□□□□ -0.27
IFT88-202ENST00000351808 TJP2Q9UDY2 1190 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 A8MV72 311 aaPredicted RBP13.35□□□□□ -0.27
IFT88-202ENST00000351808 EVPLLA8MZ36 301 aa13.35□□□□□ -0.27
IFT88-202ENST00000351808 HSPA1AP0DMV8 641 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms